Detailed information    

insolico Bioinformatically predicted

Overview


Name   nin/comJ   Type   Regulator
Locus tag   Bateq7PJ16_RS02225 Genome accession   NZ_CP023409
Coordinates   406210..406608 (-) Length   132 a.a.
NCBI ID   WP_021481824.1    Uniprot ID   -
Organism   Bacillus subtilis strain 7PJ-16     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context


Location: 401210..411608
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Bateq7PJ16_RS02190 - 402074..402271 (+) 198 Protein_391 hypothetical protein -
  Bateq7PJ16_RS02195 - 402308..402628 (+) 321 Protein_392 RDD family protein -
  Bateq7PJ16_RS02200 (Bateq7PJ16_0404) yckD 402710..403042 (+) 333 WP_015252849.1 YckD family protein -
  Bateq7PJ16_RS02205 (Bateq7PJ16_0405) - 403170..403592 (+) 423 WP_201449129.1 MarR family transcriptional regulator -
  Bateq7PJ16_RS02210 (Bateq7PJ16_0406) - 403580..403921 (+) 342 WP_032724911.1 DUF3147 family protein -
  Bateq7PJ16_RS02215 (Bateq7PJ16_0407) - 403940..404668 (+) 729 WP_046160039.1 AAA family ATPase -
  Bateq7PJ16_RS02220 (Bateq7PJ16_0408) bglC 404740..406173 (+) 1434 WP_046160040.1 6-phospho-beta-glucosidase -
  Bateq7PJ16_RS02225 (Bateq7PJ16_0409) nin/comJ 406210..406608 (-) 399 WP_021481824.1 DNA-entry nuclease inhibitor Regulator
  Bateq7PJ16_RS02230 (Bateq7PJ16_0410) nucA/comI 406635..407084 (-) 450 WP_014475770.1 DNA-entry nuclease Machinery gene
  Bateq7PJ16_RS02235 (Bateq7PJ16_0411) tlpC 407252..408973 (-) 1722 WP_046160041.1 methyl-accepting chemotaxis protein TlpC -
  Bateq7PJ16_RS02240 (Bateq7PJ16_0412) hxlB 409083..409640 (-) 558 WP_021481820.1 6-phospho-3-hexuloisomerase -
  Bateq7PJ16_RS02245 (Bateq7PJ16_0413) hxlA 409646..410278 (-) 633 WP_021481819.1 3-hexulose-6-phosphate synthase -
  Bateq7PJ16_RS02250 (Bateq7PJ16_0414) hxlR 410510..410872 (+) 363 WP_003246265.1 transcriptional activator HxlR -

Sequence


Protein


Download         Length: 132 a.a.        Molecular weight: 14962.93 Da        Isoelectric Point: 4.8991

>NTDB_id=246761 Bateq7PJ16_RS02225 WP_021481824.1 406210..406608(-) (nin/comJ) [Bacillus subtilis strain 7PJ-16]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILLRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=246761 Bateq7PJ16_RS02225 WP_021481824.1 406210..406608(-) (nin/comJ) [Bacillus subtilis strain 7PJ-16]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains


Predicted by InterproScan.

(9-129)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992


Multiple sequence alignment