Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   CNR27_RS05645 Genome accession   NZ_CP023406
Coordinates   1247231..1247635 (+) Length   134 a.a.
NCBI ID   WP_096297316.1    Uniprot ID   -
Organism   Luteimonas chenhongjianii strain 100111     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1242231..1252635
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CNR27_RS05625 (CNR27_05625) tsaB 1243700..1244437 (+) 738 WP_096297312.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  CNR27_RS05630 (CNR27_05630) lepB 1244467..1245108 (+) 642 WP_096297313.1 signal peptidase I -
  CNR27_RS05635 (CNR27_05635) - 1245196..1246068 (-) 873 WP_096297314.1 energy transducer TonB -
  CNR27_RS05640 (CNR27_05640) gshB 1246083..1247045 (-) 963 WP_096297315.1 glutathione synthase -
  CNR27_RS05645 (CNR27_05645) pilG 1247231..1247635 (+) 405 WP_096297316.1 twitching motility response regulator PilG Regulator
  CNR27_RS05650 (CNR27_05650) - 1247647..1248012 (+) 366 WP_096297317.1 response regulator -
  CNR27_RS05655 (CNR27_05655) - 1248039..1248569 (+) 531 WP_096300343.1 chemotaxis protein CheW -
  CNR27_RS05660 (CNR27_05660) - 1248610..1250631 (+) 2022 WP_096297318.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14967.21 Da        Isoelectric Point: 7.1683

>NTDB_id=246736 CNR27_RS05645 WP_096297316.1 1247231..1247635(+) (pilG) [Luteimonas chenhongjianii strain 100111]
MTSDDKPSSGSLDGLRVMVIDDSRTIRRTAETLLRREGAEVVTAVDGFEALAKIAEHKPQIIFVDIMMPRLDGYQTCALI
KNNQVFRNTPVIMLSSKDGLFDKARGRIVGSEQYVTKPFTREELLDAIRTHVTA

Nucleotide


Download         Length: 405 bp        

>NTDB_id=246736 CNR27_RS05645 WP_096297316.1 1247231..1247635(+) (pilG) [Luteimonas chenhongjianii strain 100111]
ATGACCAGTGACGACAAGCCGTCCTCCGGCAGCCTCGACGGGCTCCGGGTGATGGTGATCGATGACTCGCGCACCATCCG
CCGCACGGCCGAGACGCTGCTGCGCCGCGAGGGCGCCGAGGTGGTCACGGCTGTCGACGGGTTCGAGGCGCTGGCGAAGA
TCGCCGAGCACAAGCCGCAGATCATCTTCGTCGACATCATGATGCCGCGGCTGGACGGCTATCAGACCTGTGCGTTGATC
AAGAACAACCAGGTGTTCCGCAATACGCCGGTGATCATGCTGTCGTCCAAGGACGGCCTGTTCGACAAGGCGCGCGGCCG
CATCGTCGGCTCCGAGCAGTACGTCACCAAGCCGTTCACGCGCGAGGAACTCCTCGACGCGATCCGCACACACGTCACCG
CCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(17-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.194

92.537

0.687

Multiple sequence alignment