Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | CMV25_RS02730 | Genome accession | NZ_CP023392 |
| Coordinates | 568904..571348 (-) | Length | 814 a.a. |
| NCBI ID | WP_096039507.1 | Uniprot ID | A0A290PWR0 |
| Organism | Lactococcus raffinolactis strain WiKim0068 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 563904..576348
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CMV25_RS02710 (CMV25_02710) | - | 564544..565458 (-) | 915 | WP_061774871.1 | magnesium transporter CorA family protein | - |
| CMV25_RS02715 (CMV25_02715) | - | 565482..566606 (-) | 1125 | WP_096039505.1 | VanZ family protein | - |
| CMV25_RS02720 (CMV25_02720) | eno | 566706..568031 (-) | 1326 | WP_061774869.1 | phosphopyruvate hydratase | - |
| CMV25_RS02725 (CMV25_02725) | raiA | 568262..568813 (-) | 552 | WP_096039506.1 | ribosome hibernation-promoting factor, HPF/YfiA family | - |
| CMV25_RS02730 (CMV25_02730) | clpC | 568904..571348 (-) | 2445 | WP_096039507.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| CMV25_RS02735 (CMV25_02735) | - | 571377..571841 (-) | 465 | WP_167372298.1 | CtsR family transcriptional regulator | - |
| CMV25_RS02740 (CMV25_02740) | - | 572207..572908 (+) | 702 | WP_061774866.1 | XRE family transcriptional regulator | - |
| CMV25_RS02745 (CMV25_02745) | - | 572955..574400 (+) | 1446 | WP_096039508.1 | Y-family DNA polymerase | - |
| CMV25_RS11460 | - | 574397..574567 (+) | 171 | WP_167372299.1 | hypothetical protein | - |
| CMV25_RS02750 (CMV25_02750) | - | 574603..575004 (+) | 402 | WP_096039509.1 | YbgA family protein | - |
| CMV25_RS02755 (CMV25_02755) | - | 574988..575350 (+) | 363 | WP_061774863.1 | TIGR02328 family protein | - |
| CMV25_RS02760 (CMV25_02760) | greA | 575439..575921 (-) | 483 | WP_003140218.1 | transcription elongation factor GreA | - |
Sequence
Protein
Download Length: 814 a.a. Molecular weight: 89669.50 Da Isoelectric Point: 5.6559
>NTDB_id=246588 CMV25_RS02730 WP_096039507.1 568904..571348(-) (clpC) [Lactococcus raffinolactis strain WiKim0068]
MTQNYTHILEDILKTARVFAAGNGYDYAETSHVLAGMLSSNDSFGQNILTDHDVTIEMALDEIEQHQLPEKMQTVQNIQF
SPKVEQLLLEADALAAQNHLAETGSEHLLYVILTDDDNVAKKLLELNKIKITEIVKDLIELGNMNVKKIAKKAVTPMGKR
DIASGVAATSITPTLDSVARDVTEDARQGRIDPMIGRDKEIERVIHILSRRTKNNPVLVGEPGVGKSAIIEGLAQRMIDG
NIPANMQGVRLMSLNIANVVAGTKFRGEFEDRMTAIVDEVSQDANTIVFVDELHTIVGAGGGTDSVTDASNIMKPALARG
EFQLIGATTFNEYQKYIEKDAALERRFAKVTVEEPSSDESIVILQGLQSKFEAFHQVNFDADAVKAAVQLSVRYMPSRRL
PDKAIDLLDEAAAAVKISAKNNLSEQSKLDKKASQLDEQLQEAIINQDFVLAKSLNKDLQKLEAKREKLTVKTKSSRVSE
GDVFAVVSNLTGVPVTQMSQSEMTRLINLEKELHKRVIGQSEAVTAVASAIRRSRSGISDDRRPMGSFMFLGPTGVGKTE
LAKALAETVFGDENSMIRIDMSEYMEKFNTSRLVGAPPGYVGYDEGGQLTEQVRNKPYAVVLFDEAEKAHPDVFNLLLQI
LDDGFITDGKGRKVDFRNTIIIMTSNLGATSLRDDKTVGFGAANASTDYVAMKSRILEELKKRYRPEFLNRIDESIVFHP
LSEQELSDIVKIMAKPLIKRLAERHITLKLSATAYQLIAKNGFEPEYGARPIRKALEKKLENPLSDKILSGEIKAGNSVT
VGVSKGELTIKVID
MTQNYTHILEDILKTARVFAAGNGYDYAETSHVLAGMLSSNDSFGQNILTDHDVTIEMALDEIEQHQLPEKMQTVQNIQF
SPKVEQLLLEADALAAQNHLAETGSEHLLYVILTDDDNVAKKLLELNKIKITEIVKDLIELGNMNVKKIAKKAVTPMGKR
DIASGVAATSITPTLDSVARDVTEDARQGRIDPMIGRDKEIERVIHILSRRTKNNPVLVGEPGVGKSAIIEGLAQRMIDG
NIPANMQGVRLMSLNIANVVAGTKFRGEFEDRMTAIVDEVSQDANTIVFVDELHTIVGAGGGTDSVTDASNIMKPALARG
EFQLIGATTFNEYQKYIEKDAALERRFAKVTVEEPSSDESIVILQGLQSKFEAFHQVNFDADAVKAAVQLSVRYMPSRRL
PDKAIDLLDEAAAAVKISAKNNLSEQSKLDKKASQLDEQLQEAIINQDFVLAKSLNKDLQKLEAKREKLTVKTKSSRVSE
GDVFAVVSNLTGVPVTQMSQSEMTRLINLEKELHKRVIGQSEAVTAVASAIRRSRSGISDDRRPMGSFMFLGPTGVGKTE
LAKALAETVFGDENSMIRIDMSEYMEKFNTSRLVGAPPGYVGYDEGGQLTEQVRNKPYAVVLFDEAEKAHPDVFNLLLQI
LDDGFITDGKGRKVDFRNTIIIMTSNLGATSLRDDKTVGFGAANASTDYVAMKSRILEELKKRYRPEFLNRIDESIVFHP
LSEQELSDIVKIMAKPLIKRLAERHITLKLSATAYQLIAKNGFEPEYGARPIRKALEKKLENPLSDKILSGEIKAGNSVT
VGVSKGELTIKVID
Nucleotide
Download Length: 2445 bp
>NTDB_id=246588 CMV25_RS02730 WP_096039507.1 568904..571348(-) (clpC) [Lactococcus raffinolactis strain WiKim0068]
ATGACACAAAATTATACGCACATACTTGAAGATATTCTCAAAACAGCTCGCGTTTTTGCGGCGGGCAATGGTTATGATTA
TGCAGAAACATCACACGTCTTGGCGGGGATGTTATCGAGTAACGATAGCTTTGGCCAAAACATTCTAACGGATCACGATG
TGACGATTGAAATGGCGCTAGATGAAATCGAACAACACCAGTTACCCGAAAAAATGCAAACGGTTCAAAATATCCAATTT
TCACCTAAGGTCGAACAGCTCTTGCTTGAAGCAGATGCACTTGCAGCTCAAAATCATTTGGCAGAAACAGGGTCTGAACA
CTTGCTCTATGTCATCTTGACTGATGATGACAATGTTGCCAAGAAACTTTTGGAACTAAACAAAATCAAAATTACTGAAA
TCGTTAAAGACTTAATTGAGCTCGGTAATATGAATGTGAAAAAAATAGCTAAAAAAGCGGTCACACCGATGGGAAAACGA
GATATCGCATCGGGTGTTGCGGCGACAAGTATTACGCCAACGCTAGATTCAGTGGCGCGTGATGTGACAGAAGATGCCAG
ACAAGGGCGCATTGACCCGATGATTGGGCGTGATAAGGAAATTGAGCGCGTGATTCACATTTTGAGTCGTCGCACGAAAA
ATAATCCTGTCCTCGTTGGCGAACCAGGTGTTGGTAAATCTGCCATTATCGAAGGCTTGGCACAACGCATGATTGATGGT
AACATCCCTGCCAATATGCAAGGTGTGCGTCTTATGTCACTTAATATCGCTAATGTCGTTGCCGGTACTAAATTCCGCGG
AGAATTTGAAGACCGGATGACTGCGATTGTTGATGAAGTCAGCCAAGATGCTAACACTATCGTGTTTGTTGATGAGCTCC
ATACTATCGTCGGTGCTGGTGGCGGAACGGATTCTGTTACCGATGCCTCAAACATTATGAAACCTGCACTAGCTCGTGGT
GAGTTTCAGCTGATTGGCGCAACGACCTTTAACGAATACCAAAAATACATCGAAAAAGATGCTGCTCTGGAACGTCGCTT
TGCAAAAGTTACTGTTGAAGAGCCATCTTCAGACGAATCGATTGTAATTCTACAAGGTCTTCAAAGCAAATTTGAAGCCT
TTCATCAGGTAAATTTTGACGCTGATGCAGTCAAGGCAGCGGTTCAGCTCAGTGTTCGCTATATGCCAAGTCGCAGACTG
CCGGATAAGGCCATTGACTTACTCGATGAAGCAGCTGCTGCCGTTAAAATTTCAGCTAAAAATAATTTATCCGAACAAAG
TAAGCTAGATAAAAAAGCATCACAGCTTGATGAACAGTTACAAGAAGCGATTATCAATCAAGATTTTGTGCTAGCTAAAA
GCTTAAACAAAGATCTTCAAAAACTTGAAGCCAAACGTGAGAAACTAACGGTTAAAACAAAGTCGTCTCGTGTGAGCGAA
GGTGATGTCTTTGCGGTTGTGTCTAACTTGACTGGCGTGCCTGTCACACAGATGAGCCAAAGTGAGATGACGCGTTTGAT
TAACTTAGAAAAAGAACTCCATAAACGCGTTATCGGTCAAAGCGAAGCCGTTACAGCTGTTGCTAGTGCTATCCGTCGTA
GTCGTTCAGGCATCTCAGATGACAGACGTCCTATGGGTTCCTTCATGTTCTTGGGGCCTACCGGTGTCGGGAAGACAGAG
CTTGCTAAAGCTCTGGCAGAGACCGTTTTCGGCGATGAAAACAGCATGATTCGTATCGATATGAGCGAATATATGGAGAA
ATTTAACACCAGTCGTTTAGTTGGAGCACCTCCTGGCTATGTTGGCTATGACGAGGGCGGTCAGCTAACCGAGCAGGTGC
GCAACAAGCCTTATGCTGTCGTCCTATTTGACGAGGCTGAGAAAGCCCATCCGGATGTCTTTAACCTCCTGCTCCAAATC
CTTGATGACGGCTTCATCACGGATGGTAAGGGGCGCAAGGTAGACTTCCGCAACACAATCATCATCATGACCAGTAACTT
GGGTGCGACCTCATTACGCGACGATAAGACGGTCGGATTTGGTGCAGCCAATGCCTCAACCGACTACGTCGCCATGAAGT
CTAGAATTTTAGAAGAGTTGAAAAAACGGTATCGCCCAGAGTTTCTCAACCGTATCGATGAAAGCATTGTTTTCCACCCA
CTTTCTGAGCAGGAATTATCAGATATCGTAAAAATCATGGCTAAACCATTGATTAAACGTTTGGCAGAACGTCACATCAC
CTTGAAACTTTCTGCCACTGCCTATCAGCTTATCGCTAAAAATGGCTTTGAACCAGAATATGGGGCCCGTCCAATCAGAA
AAGCTTTGGAGAAAAAACTTGAGAATCCTCTGTCGGATAAAATTTTGTCAGGCGAAATTAAGGCTGGAAATAGTGTGACA
GTAGGCGTTTCCAAAGGTGAGTTGACAATCAAAGTTATTGATTAA
ATGACACAAAATTATACGCACATACTTGAAGATATTCTCAAAACAGCTCGCGTTTTTGCGGCGGGCAATGGTTATGATTA
TGCAGAAACATCACACGTCTTGGCGGGGATGTTATCGAGTAACGATAGCTTTGGCCAAAACATTCTAACGGATCACGATG
TGACGATTGAAATGGCGCTAGATGAAATCGAACAACACCAGTTACCCGAAAAAATGCAAACGGTTCAAAATATCCAATTT
TCACCTAAGGTCGAACAGCTCTTGCTTGAAGCAGATGCACTTGCAGCTCAAAATCATTTGGCAGAAACAGGGTCTGAACA
CTTGCTCTATGTCATCTTGACTGATGATGACAATGTTGCCAAGAAACTTTTGGAACTAAACAAAATCAAAATTACTGAAA
TCGTTAAAGACTTAATTGAGCTCGGTAATATGAATGTGAAAAAAATAGCTAAAAAAGCGGTCACACCGATGGGAAAACGA
GATATCGCATCGGGTGTTGCGGCGACAAGTATTACGCCAACGCTAGATTCAGTGGCGCGTGATGTGACAGAAGATGCCAG
ACAAGGGCGCATTGACCCGATGATTGGGCGTGATAAGGAAATTGAGCGCGTGATTCACATTTTGAGTCGTCGCACGAAAA
ATAATCCTGTCCTCGTTGGCGAACCAGGTGTTGGTAAATCTGCCATTATCGAAGGCTTGGCACAACGCATGATTGATGGT
AACATCCCTGCCAATATGCAAGGTGTGCGTCTTATGTCACTTAATATCGCTAATGTCGTTGCCGGTACTAAATTCCGCGG
AGAATTTGAAGACCGGATGACTGCGATTGTTGATGAAGTCAGCCAAGATGCTAACACTATCGTGTTTGTTGATGAGCTCC
ATACTATCGTCGGTGCTGGTGGCGGAACGGATTCTGTTACCGATGCCTCAAACATTATGAAACCTGCACTAGCTCGTGGT
GAGTTTCAGCTGATTGGCGCAACGACCTTTAACGAATACCAAAAATACATCGAAAAAGATGCTGCTCTGGAACGTCGCTT
TGCAAAAGTTACTGTTGAAGAGCCATCTTCAGACGAATCGATTGTAATTCTACAAGGTCTTCAAAGCAAATTTGAAGCCT
TTCATCAGGTAAATTTTGACGCTGATGCAGTCAAGGCAGCGGTTCAGCTCAGTGTTCGCTATATGCCAAGTCGCAGACTG
CCGGATAAGGCCATTGACTTACTCGATGAAGCAGCTGCTGCCGTTAAAATTTCAGCTAAAAATAATTTATCCGAACAAAG
TAAGCTAGATAAAAAAGCATCACAGCTTGATGAACAGTTACAAGAAGCGATTATCAATCAAGATTTTGTGCTAGCTAAAA
GCTTAAACAAAGATCTTCAAAAACTTGAAGCCAAACGTGAGAAACTAACGGTTAAAACAAAGTCGTCTCGTGTGAGCGAA
GGTGATGTCTTTGCGGTTGTGTCTAACTTGACTGGCGTGCCTGTCACACAGATGAGCCAAAGTGAGATGACGCGTTTGAT
TAACTTAGAAAAAGAACTCCATAAACGCGTTATCGGTCAAAGCGAAGCCGTTACAGCTGTTGCTAGTGCTATCCGTCGTA
GTCGTTCAGGCATCTCAGATGACAGACGTCCTATGGGTTCCTTCATGTTCTTGGGGCCTACCGGTGTCGGGAAGACAGAG
CTTGCTAAAGCTCTGGCAGAGACCGTTTTCGGCGATGAAAACAGCATGATTCGTATCGATATGAGCGAATATATGGAGAA
ATTTAACACCAGTCGTTTAGTTGGAGCACCTCCTGGCTATGTTGGCTATGACGAGGGCGGTCAGCTAACCGAGCAGGTGC
GCAACAAGCCTTATGCTGTCGTCCTATTTGACGAGGCTGAGAAAGCCCATCCGGATGTCTTTAACCTCCTGCTCCAAATC
CTTGATGACGGCTTCATCACGGATGGTAAGGGGCGCAAGGTAGACTTCCGCAACACAATCATCATCATGACCAGTAACTT
GGGTGCGACCTCATTACGCGACGATAAGACGGTCGGATTTGGTGCAGCCAATGCCTCAACCGACTACGTCGCCATGAAGT
CTAGAATTTTAGAAGAGTTGAAAAAACGGTATCGCCCAGAGTTTCTCAACCGTATCGATGAAAGCATTGTTTTCCACCCA
CTTTCTGAGCAGGAATTATCAGATATCGTAAAAATCATGGCTAAACCATTGATTAAACGTTTGGCAGAACGTCACATCAC
CTTGAAACTTTCTGCCACTGCCTATCAGCTTATCGCTAAAAATGGCTTTGAACCAGAATATGGGGCCCGTCCAATCAGAA
AAGCTTTGGAGAAAAAACTTGAGAATCCTCTGTCGGATAAAATTTTGTCAGGCGAAATTAAGGCTGGAAATAGTGTGACA
GTAGGCGTTTCCAAAGGTGAGTTGACAATCAAAGTTATTGATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
62.099 |
99.509 |
0.618 |
| clpC | Streptococcus pneumoniae Rx1 |
49.337 |
100 |
0.502 |
| clpC | Streptococcus pneumoniae D39 |
49.337 |
100 |
0.502 |
| clpC | Streptococcus thermophilus LMD-9 |
49.041 |
100 |
0.502 |
| clpC | Streptococcus pneumoniae TIGR4 |
49.216 |
100 |
0.501 |
| clpC | Streptococcus thermophilus LMG 18311 |
48.801 |
100 |
0.5 |
| clpC | Streptococcus mutans UA159 |
47.368 |
100 |
0.486 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
48.112 |
100 |
0.485 |
| clpE | Streptococcus pneumoniae TIGR4 |
46.646 |
78.747 |
0.367 |
| clpE | Streptococcus pneumoniae Rx1 |
46.646 |
78.747 |
0.367 |
| clpE | Streptococcus pneumoniae D39 |
46.646 |
78.747 |
0.367 |
| clpE | Streptococcus pneumoniae R6 |
46.646 |
78.747 |
0.367 |
| clpE | Streptococcus mutans UA159 |
46.178 |
78.747 |
0.364 |