Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | CNH35_RS08295 | Genome accession | NZ_CP023390 |
| Coordinates | 1614038..1614337 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus subsp. aureus str. Newman strain NYU_Newman | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1609038..1619337
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CNH35_RS08270 (CNH35_08235) | gcvPA | 1610250..1611596 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| CNH35_RS08275 (CNH35_08240) | gcvT | 1611616..1612707 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| CNH35_RS08280 (CNH35_08245) | - | 1612866..1613390 (-) | 525 | WP_001015117.1 | shikimate kinase | - |
| CNH35_RS08285 (CNH35_08250) | - | 1613380..1613526 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| CNH35_RS08290 (CNH35_08255) | comGF | 1613623..1614120 (-) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| CNH35_RS08295 (CNH35_08260) | comGE | 1614038..1614337 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| CNH35_RS08300 (CNH35_08265) | comGD | 1614324..1614770 (-) | 447 | WP_001790850.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| CNH35_RS08305 (CNH35_08270) | comGC | 1614748..1615059 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| CNH35_RS08310 (CNH35_08275) | comGB | 1615073..1616143 (-) | 1071 | WP_000775708.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| CNH35_RS08315 (CNH35_08280) | comGA | 1616115..1617089 (-) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CNH35_RS08320 (CNH35_08285) | - | 1617141..1617764 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| CNH35_RS08325 (CNH35_08290) | - | 1617761..1618090 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| CNH35_RS08330 (CNH35_08295) | - | 1618090..1619076 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| CNH35_RS08335 (CNH35_08300) | - | 1619073..1619276 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=246512 CNH35_RS08295 WP_000844413.1 1614038..1614337(-) (comGE) [Staphylococcus aureus subsp. aureus str. Newman strain NYU_Newman]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=246512 CNH35_RS08295 WP_000844413.1 1614038..1614337(-) (comGE) [Staphylococcus aureus subsp. aureus str. Newman strain NYU_Newman]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |