Detailed information NTG0246191

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: CMV18_RS18610
• Genome accession: NZ_CP023341
• Coordinates: 3701311..3702459 (-)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain LG37
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3696311..3707459

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CMV18_RS18575 (CMV18_18585)	-	3696447..3697205 (-)	759	WP_007609404.1	ABC transporter ATP-binding protein	-
CMV18_RS18580 (CMV18_18590)	-	3697199..3698146 (-)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
CMV18_RS18585 (CMV18_18595)	ceuB	3698136..3699089 (-)	954	WP_032872883.1	ABC transporter permease	Machinery gene
CMV18_RS18590 (CMV18_18600)	-	3699503..3700867 (+)	1365	WP_007609394.1	aspartate kinase	-
CMV18_RS18595 (CMV18_18605)	-	3700947..3701057 (+)	111	WP_369878517.1	YjcZ family sporulation protein	-
CMV18_RS18605 (CMV18_18610)	phrC	3701208..3701327 (-)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
CMV18_RS18610 (CMV18_18615)	rapC	3701311..3702459 (-)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
CMV18_RS18615 (CMV18_18620)	-	3702612..3704045 (-)	1434	WP_161503657.1	HAMP domain-containing sensor histidine kinase	-
CMV18_RS18620 (CMV18_18625)	-	3704032..3704715 (-)	684	WP_032872879.1	response regulator transcription factor	-
CMV18_RS18625 (CMV18_18630)	-	3704928..3706358 (+)	1431	WP_032872876.1	ABC transporter permease	-
CMV18_RS18630 (CMV18_18635)	-	3706373..3707056 (+)	684	WP_032872874.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=246191 CMV18_RS18610 WP_007410270.1 3701311..3702459(-) (rapC) [Bacillus velezensis strain LG37]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=246191 CMV18_RS18610 WP_007410270.1 3701311..3702459(-) (rapC) [Bacillus velezensis strain LG37]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTACCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAGGGGCTTCTCGATTATTACGTCAATTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCATGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTGGAGCAGGACACATATAACGTCCGGATTATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568