Detailed information NTG0246128

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: CMV18_RS02780
• Genome accession: NZ_CP023341
• Coordinates: 516491..517636 (-)
• Length: 381 a.a.
• NCBI ID: WP_074534220.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain LG37
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 511491..522636

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CMV18_RS02755 (CMV18_02750)	-	511774..512207 (+)	434	Protein_506	hypothetical protein	-
CMV18_RS02760 (CMV18_02755)	-	512232..514304 (-)	2073	WP_142943460.1	transglycosylase domain-containing protein	-
CMV18_RS02765 (CMV18_02760)	speE	514504..515334 (+)	831	WP_003151052.1	spermidine synthase	-
CMV18_RS02770 (CMV18_02765)	speB	515393..516265 (+)	873	WP_032875884.1	agmatinase	-
CMV18_RS02775	-	516388..516507 (-)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
CMV18_RS02780 (CMV18_02770)	rapF	516491..517636 (-)	1146	WP_074534220.1	Rap family tetratricopeptide repeat protein	Regulator
CMV18_RS02790 (CMV18_02780)	-	517867..519222 (+)	1356	WP_032875887.1	YncE family protein	-
CMV18_RS02795 (CMV18_02785)	-	519262..520638 (+)	1377	WP_032875890.1	YncE family protein	-
CMV18_RS02800 (CMV18_02790)	-	520645..521157 (-)	513	Protein_514	bacteriocin biosynthesis protein AlbG	-
CMV18_RS02805 (CMV18_02795)	-	521311..521739 (+)	429	WP_032869448.1	DUF1934 domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45737.21 Da
• Isoelectric Point: 5.0614

>NTDB_id=246128 CMV18_RS02780 WP_074534220.1 516491..517636(-) (rapF) [Bacillus velezensis strain LG37]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDAEKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLKNIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLENKLMYADIEELALDVAKYYYTQEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=246128 CMV18_RS02780 WP_074534220.1 516491..517636(-) (rapF) [Bacillus velezensis strain LG37]
GTGGCGAGTGTTTTATCATCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAACTTGCAGGTCTGGAAGATGATCAGGATCTTCATCTATACTATT
CTCTCATGGAATTCCGTCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGTCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGCAGAAAAATATAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGGACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGTCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAAAAAATATAGATAACGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTAGAATACTTGTATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAATAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACACAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAGGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (188-254)

• Tetratricopeptide repeat (TPR_8) (265-293)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.079	100	0.701
rapC	Bacillus subtilis subsp. subtilis str. 168	54.211	99.738	0.541