Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   CLI97_RS21315 Genome accession   NZ_CP023320
Coordinates   2355309..2355473 (+) Length   54 a.a.
NCBI ID   WP_301179044.1    Uniprot ID   -
Organism   Bacillus velezensis strain SCGB     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2350309..2360473
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CLI97_RS21310 srfAB 2352254..2355244 (+) 2991 Protein_2412 surfactin non-ribosomal peptide synthetase SrfAB -
  CLI97_RS21315 comS 2355309..2355473 (+) 165 WP_301179044.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6155.15 Da        Isoelectric Point: 11.3346

>NTDB_id=246080 CLI97_RS21315 WP_301179044.1 2355309..2355473(+) (comS) [Bacillus velezensis strain SCGB]
MRARRNSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCCKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=246080 CLI97_RS21315 WP_301179044.1 2355309..2355473(+) (comS) [Bacillus velezensis strain SCGB]
ATGAGAGCGAGGAGGAACAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGCAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-51)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

56.522

85.185

0.481

Multiple sequence alignment