Detailed information    

insolico Bioinformatically predicted

Overview


Name   kre   Type   Regulator
Locus tag   CLI97_RS17695 Genome accession   NZ_CP023320
Coordinates   3350461..3350925 (-) Length   154 a.a.
NCBI ID   WP_014417605.1    Uniprot ID   I2C4C5
Organism   Bacillus velezensis strain SCGB     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 3345461..3355925
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CLI97_RS17670 (CLI97_03488) - 3345941..3347761 (+) 1821 WP_003154628.1 PAS domain-containing protein -
  CLI97_RS17675 (CLI97_03489) - 3347737..3348956 (-) 1220 Protein_3414 aminotransferase A -
  CLI97_RS21060 (CLI97_03490) - 3349157..3349318 (-) 162 WP_007409608.1 hypothetical protein -
  CLI97_RS17690 (CLI97_03491) cheV 3349507..3350418 (+) 912 WP_014304917.1 chemotaxis protein CheV -
  CLI97_RS17695 (CLI97_03492) kre 3350461..3350925 (-) 465 WP_014417605.1 YkyB family protein Regulator
  CLI97_RS17700 (CLI97_03493) - 3351048..3352340 (-) 1293 WP_024085236.1 MFS transporter -
  CLI97_RS17705 (CLI97_03494) - 3352416..3352910 (-) 495 WP_088037173.1 L,D-transpeptidase family protein -
  CLI97_RS17710 (CLI97_03495) - 3352985..3353848 (-) 864 WP_014304919.1 metallophosphoesterase -
  CLI97_RS17715 (CLI97_03496) fadH 3353992..3354756 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  CLI97_RS17720 (CLI97_03497) - 3354867..3355415 (+) 549 WP_094246985.1 hypothetical protein -

Sequence


Protein


Download         Length: 154 a.a.        Molecular weight: 17812.60 Da        Isoelectric Point: 10.5497

>NTDB_id=246072 CLI97_RS17695 WP_014417605.1 3350461..3350925(-) (kre) [Bacillus velezensis strain SCGB]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFRHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=246072 CLI97_RS17695 WP_014417605.1 3350461..3350925(-) (kre) [Bacillus velezensis strain SCGB]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCGGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains


Predicted by InterproScan.

(13-127)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB I2C4C5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929


Multiple sequence alignment