Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | CLI97_RS10870 | Genome accession | NZ_CP023320 |
| Coordinates | 2052614..2052904 (-) | Length | 96 a.a. |
| NCBI ID | WP_169510469.1 | Uniprot ID | - |
| Organism | Bacillus velezensis strain SCGB | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2047614..2057904
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CLI97_RS10830 (CLI97_02140) | darA | 2047630..2047959 (+) | 330 | WP_004264734.1 | cyclic di-AMP receptor DarA | - |
| CLI97_RS10835 (CLI97_02141) | - | 2047972..2048412 (+) | 441 | WP_004264730.1 | YaaR family protein | - |
| CLI97_RS10840 (CLI97_02142) | holB | 2048424..2049413 (+) | 990 | WP_094247308.1 | DNA polymerase III subunit delta' | - |
| CLI97_RS10845 (CLI97_02143) | ricT | 2049416..2050243 (+) | 828 | WP_004264723.1 | competence/sporulation regulator complex protein RicT | - |
| CLI97_RS10850 (CLI97_02144) | yabA | 2050258..2050617 (+) | 360 | WP_004264720.1 | replication initiation-control protein YabA | - |
| CLI97_RS10855 (CLI97_02145) | - | 2050678..2051421 (+) | 744 | WP_004264717.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| CLI97_RS10860 (CLI97_02146) | - | 2051408..2051707 (+) | 300 | WP_007409921.1 | GIY-YIG nuclease family protein | - |
| CLI97_RS10865 (CLI97_02147) | rsmI | 2051682..2052563 (+) | 882 | WP_094247307.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| CLI97_RS10870 (CLI97_02148) | abrB | 2052614..2052904 (-) | 291 | WP_169510469.1 | transition state genes transcriptional regulator AbrB | Regulator |
| CLI97_RS10875 (CLI97_02149) | metG | 2053387..2055378 (+) | 1992 | WP_025854082.1 | methionine--tRNA ligase | - |
| CLI97_RS10880 (CLI97_02150) | - | 2055454..2056221 (+) | 768 | WP_032868379.1 | TatD family hydrolase | - |
| CLI97_RS10885 (CLI97_02151) | - | 2056356..2057681 (+) | 1326 | WP_094247906.1 | G5 and 3D domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10753.57 Da Isoelectric Point: 6.3482
>NTDB_id=246046 CLI97_RS10870 WP_169510469.1 2052614..2052904(-) (abrB) [Bacillus velezensis strain SCGB]
MLMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNQK
MLMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNQK
Nucleotide
Download Length: 291 bp
>NTDB_id=246046 CLI97_RS10870 WP_169510469.1 2052614..2052904(-) (abrB) [Bacillus velezensis strain SCGB]
CTGTTAATGAAATCTACTGGTATCGTACGTAAAGTTGATGAACTCGGACGCGTCGTTATCCCTATCGAACTTCGCCGTAC
ACTGGGCATCGCAGAAAAAGACGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCCGGCGGCAAATTGGTACTCAGCAAAGAAGGC
GCTGAGCAAATCATCTCTGAAATTCAAAACCAGCTTCAAAACCAAAAATAA
CTGTTAATGAAATCTACTGGTATCGTACGTAAAGTTGATGAACTCGGACGCGTCGTTATCCCTATCGAACTTCGCCGTAC
ACTGGGCATCGCAGAAAAAGACGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCCGGCGGCAAATTGGTACTCAGCAAAGAAGGC
GCTGAGCAAATCATCTCTGAAATTCAAAACCAGCTTCAAAACCAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
97.917 |
100 |
0.979 |