Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | CEQ83_RS21785 | Genome accession | NZ_CP023317 |
| Coordinates | 4256664..4257716 (-) | Length | 350 a.a. |
| NCBI ID | WP_028411611.1 | Uniprot ID | - |
| Organism | Priestia megaterium strain A | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4251664..4262716
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CEQ83_RS21745 (CEQ83_21885) | - | 4252680..4253504 (+) | 825 | WP_098112943.1 | YqhG family protein | - |
| CEQ83_RS21750 (CEQ83_21890) | - | 4253528..4253713 (-) | 186 | WP_013059170.1 | YqzE family protein | - |
| CEQ83_RS21755 (CEQ83_21895) | comGG | 4253757..4254131 (-) | 375 | WP_098112944.1 | competence type IV pilus minor pilin ComGG | - |
| CEQ83_RS21760 (CEQ83_21900) | comGF | 4254121..4254558 (-) | 438 | WP_098112945.1 | competence type IV pilus minor pilin ComGF | - |
| CEQ83_RS21765 (CEQ83_21905) | - | 4254555..4254893 (-) | 339 | WP_098112946.1 | type II secretion system protein | - |
| CEQ83_RS21770 (CEQ83_21910) | comGD | 4254877..4255314 (-) | 438 | WP_016765559.1 | competence type IV pilus minor pilin ComGD | - |
| CEQ83_RS21775 (CEQ83_21915) | comGC | 4255301..4255612 (-) | 312 | WP_016765560.1 | competence type IV pilus major pilin ComGC | - |
| CEQ83_RS21780 (CEQ83_21920) | comGB | 4255627..4256673 (-) | 1047 | WP_155017509.1 | competence type IV pilus assembly protein ComGB | - |
| CEQ83_RS21785 (CEQ83_21925) | comGA | 4256664..4257716 (-) | 1053 | WP_028411611.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CEQ83_RS21790 (CEQ83_21930) | - | 4257987..4258370 (-) | 384 | WP_028411612.1 | Spx/MgsR family RNA polymerase-binding regulatory protein | - |
| CEQ83_RS21795 (CEQ83_21935) | - | 4258632..4258868 (+) | 237 | WP_013059179.1 | DUF2626 domain-containing protein | - |
| CEQ83_RS21800 (CEQ83_21940) | - | 4258906..4259538 (-) | 633 | WP_028411613.1 | MBL fold metallo-hydrolase | - |
| CEQ83_RS21805 (CEQ83_21945) | - | 4259748..4259924 (+) | 177 | WP_028411614.1 | DUF2759 domain-containing protein | - |
| CEQ83_RS21810 (CEQ83_21950) | - | 4259960..4260862 (-) | 903 | WP_028411615.1 | M14 family metallocarboxypeptidase | - |
| CEQ83_RS21815 (CEQ83_21955) | - | 4260974..4261942 (-) | 969 | WP_098112947.1 | ROK family glucokinase | - |
| CEQ83_RS21820 (CEQ83_21960) | - | 4261945..4262151 (-) | 207 | WP_028411617.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 350 a.a. Molecular weight: 39596.97 Da Isoelectric Point: 9.0586
>NTDB_id=245985 CEQ83_RS21785 WP_028411611.1 4256664..4257716(-) (comGA) [Priestia megaterium strain A]
MTEIEQFATYVIRDACECRSSDVHIVPRKKDAVIQLRIDQELILKRVISKEMSERLISHFKFLGGMDIGERRKPQNGALT
TSVDHYQVNLRLSTLPTSHDESLVIRLLPHQQSTSLKHLSLFPEHTKKLISLLKFSHGLIIFTGPTGSGKTTTLYTLLHE
VKHLFNRNVITLEDPIEKPSETVLQVQVNERAGITYTTGLKAILRHDPDIIMVGEIRDSETAKIAVRAALTGHLVLTTMH
TKDTKGSLYRLLEFGVSFQEMEQTLVAVAAQRLVEIRCPLCSGKCHPACKKMRKHRQSSIYELLYGKELSAVMREVKGEN
ADYDYKTLRDVILKGIALGYLYPHSLDGWG
MTEIEQFATYVIRDACECRSSDVHIVPRKKDAVIQLRIDQELILKRVISKEMSERLISHFKFLGGMDIGERRKPQNGALT
TSVDHYQVNLRLSTLPTSHDESLVIRLLPHQQSTSLKHLSLFPEHTKKLISLLKFSHGLIIFTGPTGSGKTTTLYTLLHE
VKHLFNRNVITLEDPIEKPSETVLQVQVNERAGITYTTGLKAILRHDPDIIMVGEIRDSETAKIAVRAALTGHLVLTTMH
TKDTKGSLYRLLEFGVSFQEMEQTLVAVAAQRLVEIRCPLCSGKCHPACKKMRKHRQSSIYELLYGKELSAVMREVKGEN
ADYDYKTLRDVILKGIALGYLYPHSLDGWG
Nucleotide
Download Length: 1053 bp
>NTDB_id=245985 CEQ83_RS21785 WP_028411611.1 4256664..4257716(-) (comGA) [Priestia megaterium strain A]
TTGACCGAAATTGAACAGTTTGCTACTTACGTTATACGAGATGCATGTGAGTGTCGAAGTTCTGATGTGCATATTGTGCC
CCGAAAGAAAGATGCTGTGATTCAGCTGCGAATTGACCAGGAGCTTATTTTAAAGAGGGTTATTTCAAAGGAAATGTCTG
AACGGCTCATTTCGCATTTTAAGTTTTTAGGGGGAATGGATATTGGGGAGCGCAGAAAACCTCAAAATGGTGCATTGACC
ACTTCCGTTGATCACTATCAAGTAAATTTGCGTTTATCAACTCTTCCTACTTCTCATGATGAAAGTCTTGTTATTCGGCT
TTTGCCTCATCAACAATCTACCTCTCTCAAACATTTATCTCTTTTTCCTGAACATACTAAAAAGCTTATTTCTCTCTTGA
AATTCTCTCATGGATTAATTATTTTTACCGGTCCTACAGGATCAGGTAAAACCACTACTCTATATACTCTTTTACACGAA
GTAAAGCACCTTTTTAATCGAAATGTTATTACACTAGAAGATCCTATTGAAAAACCGAGTGAAACCGTGCTTCAAGTGCA
GGTAAATGAACGCGCAGGGATTACGTATACGACTGGTTTAAAAGCTATATTGCGCCATGATCCAGACATTATCATGGTGG
GAGAAATAAGAGATAGTGAGACCGCCAAAATTGCTGTGAGAGCAGCGCTTACCGGACACTTGGTTTTGACAACGATGCAT
ACTAAAGATACAAAAGGATCTTTGTACAGGCTGCTTGAGTTTGGCGTTAGCTTTCAAGAAATGGAGCAGACTCTTGTAGC
AGTAGCTGCACAGCGTCTTGTAGAAATTCGCTGTCCGCTGTGTTCGGGAAAATGCCACCCTGCTTGTAAAAAAATGAGGA
AGCATCGTCAGTCCAGCATATACGAATTGCTTTATGGCAAGGAGCTTAGCGCAGTGATGAGAGAAGTGAAAGGAGAAAAT
GCGGATTATGATTATAAGACGCTCCGAGATGTTATTCTAAAAGGAATCGCGCTAGGCTATTTATATCCGCATTCGCTAGA
CGGATGGGGGTAA
TTGACCGAAATTGAACAGTTTGCTACTTACGTTATACGAGATGCATGTGAGTGTCGAAGTTCTGATGTGCATATTGTGCC
CCGAAAGAAAGATGCTGTGATTCAGCTGCGAATTGACCAGGAGCTTATTTTAAAGAGGGTTATTTCAAAGGAAATGTCTG
AACGGCTCATTTCGCATTTTAAGTTTTTAGGGGGAATGGATATTGGGGAGCGCAGAAAACCTCAAAATGGTGCATTGACC
ACTTCCGTTGATCACTATCAAGTAAATTTGCGTTTATCAACTCTTCCTACTTCTCATGATGAAAGTCTTGTTATTCGGCT
TTTGCCTCATCAACAATCTACCTCTCTCAAACATTTATCTCTTTTTCCTGAACATACTAAAAAGCTTATTTCTCTCTTGA
AATTCTCTCATGGATTAATTATTTTTACCGGTCCTACAGGATCAGGTAAAACCACTACTCTATATACTCTTTTACACGAA
GTAAAGCACCTTTTTAATCGAAATGTTATTACACTAGAAGATCCTATTGAAAAACCGAGTGAAACCGTGCTTCAAGTGCA
GGTAAATGAACGCGCAGGGATTACGTATACGACTGGTTTAAAAGCTATATTGCGCCATGATCCAGACATTATCATGGTGG
GAGAAATAAGAGATAGTGAGACCGCCAAAATTGCTGTGAGAGCAGCGCTTACCGGACACTTGGTTTTGACAACGATGCAT
ACTAAAGATACAAAAGGATCTTTGTACAGGCTGCTTGAGTTTGGCGTTAGCTTTCAAGAAATGGAGCAGACTCTTGTAGC
AGTAGCTGCACAGCGTCTTGTAGAAATTCGCTGTCCGCTGTGTTCGGGAAAATGCCACCCTGCTTGTAAAAAAATGAGGA
AGCATCGTCAGTCCAGCATATACGAATTGCTTTATGGCAAGGAGCTTAGCGCAGTGATGAGAGAAGTGAAAGGAGAAAAT
GCGGATTATGATTATAAGACGCTCCGAGATGTTATTCTAAAAGGAATCGCGCTAGGCTATTTATATCCGCATTCGCTAGA
CGGATGGGGGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
58.571 |
100 |
0.586 |