Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   CEQ83_RS15780 Genome accession   NZ_CP023317
Coordinates   3116140..3117090 (-) Length   316 a.a.
NCBI ID   WP_028414467.1    Uniprot ID   A0AAX6BLZ5
Organism   Priestia megaterium strain A     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 3111140..3122090
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CEQ83_RS15755 (CEQ83_15855) - 3111207..3112286 (+) 1080 WP_099331135.1 PrsW family intramembrane metalloprotease -
  CEQ83_RS27135 - 3112755..3112895 (-) 141 WP_014459290.1 hypothetical protein -
  CEQ83_RS15760 (CEQ83_15865) - 3113158..3113424 (-) 267 Protein_3110 manganese catalase family protein -
  CEQ83_RS15765 (CEQ83_15870) - 3113468..3114424 (-) 957 WP_028414464.1 siderophore ABC transporter substrate-binding protein -
  CEQ83_RS15770 (CEQ83_15875) - 3114448..3115206 (-) 759 WP_028414465.1 ABC transporter ATP-binding protein -
  CEQ83_RS15775 (CEQ83_15880) - 3115200..3116147 (-) 948 WP_034267834.1 iron chelate uptake ABC transporter family permease subunit -
  CEQ83_RS15780 (CEQ83_15885) ceuB 3116140..3117090 (-) 951 WP_028414467.1 ABC transporter permease Machinery gene
  CEQ83_RS15785 (CEQ83_15890) - 3117654..3118460 (-) 807 WP_013057892.1 cell wall hydrolase -
  CEQ83_RS15790 (CEQ83_15895) - 3118823..3119077 (+) 255 WP_013057893.1 hypothetical protein -
  CEQ83_RS27140 - 3119159..3119323 (-) 165 WP_013057894.1 hypothetical protein -
  CEQ83_RS15795 (CEQ83_15900) - 3119814..3119999 (-) 186 WP_014459286.1 hypothetical protein -
  CEQ83_RS15800 (CEQ83_15910) - 3120556..3121119 (-) 564 Protein_3119 NAD(P)H-dependent oxidoreductase -
  CEQ83_RS15805 (CEQ83_15915) lepB 3121355..3121915 (-) 561 WP_098112348.1 signal peptidase I -

Sequence


Protein


Download         Length: 316 a.a.        Molecular weight: 34953.16 Da        Isoelectric Point: 9.9188

>NTDB_id=245973 CEQ83_RS15780 WP_028414467.1 3116140..3117090(-) (ceuB) [Priestia megaterium strain A]
MKFYQLILVFAVLAVSSLFVGVQDLSAMDLFHLTKEESQTLFFSRFPRLLSIIMAGMSLSICGLIMQQITRNKFVSPTTA
GTMDWARLGVLISLLVFASASPLLKMSIAFIFSLAGNLLFMRILDRIKFNDTIYIPLVGLMLGSIVSSLATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYLYADKFTVAGMGESFSINLGVKYKQIVNIGLVIVSLITSITILTVGM
LPFLGLIIPNIVSIYRGDHLRKSLPHTAVLGAVFVLACDILGRVIIFPYEVSIGLMVGVIGSAIFLFMLIRRGRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=245973 CEQ83_RS15780 WP_028414467.1 3116140..3117090(-) (ceuB) [Priestia megaterium strain A]
TTGAAGTTTTATCAGTTAATTCTTGTGTTTGCTGTACTAGCGGTTTCGTCTCTTTTTGTAGGAGTACAAGACCTGTCAGC
GATGGATCTGTTTCATTTAACAAAAGAAGAAAGCCAAACGCTGTTTTTTAGTCGTTTTCCTAGGCTTTTGAGTATTATTA
TGGCGGGAATGAGCCTTAGTATTTGCGGGTTAATTATGCAGCAAATTACGCGAAATAAGTTTGTCTCTCCAACAACTGCA
GGAACGATGGACTGGGCAAGACTTGGTGTGTTGATTTCTCTACTAGTATTTGCTTCAGCAAGTCCTCTATTAAAAATGAG
CATTGCTTTCATTTTCTCACTTGCGGGCAATCTATTGTTTATGAGAATACTAGACAGAATTAAATTTAACGATACGATTT
ATATTCCACTAGTTGGTTTAATGCTCGGCAGTATCGTAAGTTCCCTAGCTACCTTCATCGCTTACAAATACGATTTGATT
CAAAACCTTTCTTCATGGCTGCAAGGCGACTTTTCGCTAGTAGTCAAAGGGCGATATGAACTTTTATACCTGAGTATACC
GCTCTTAATAATTGCTTATCTTTACGCAGATAAGTTCACGGTTGCTGGTATGGGAGAAAGCTTTTCAATCAATTTAGGCG
TGAAATACAAACAAATCGTAAACATTGGATTAGTCATTGTTTCGCTTATTACGTCGATTACGATTTTGACCGTTGGCATG
CTGCCTTTTTTAGGATTAATCATCCCCAATATCGTATCGATTTACCGTGGAGATCATTTGCGAAAAAGCCTGCCTCATAC
AGCGGTGCTTGGAGCTGTATTCGTACTTGCGTGCGATATTTTAGGCAGAGTCATTATTTTCCCTTATGAAGTTTCTATTG
GGTTAATGGTCGGTGTAATAGGAAGTGCGATCTTTCTTTTTATGCTGATAAGGAGAGGTCGTTATGCATAA

Domains


Predicted by InterproScan.

(10-311)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.333

94.937

0.497


Multiple sequence alignment