Detailed information NTG0245863

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: CMV05_RS02810
• Genome accession: NZ_CP023310
• Coordinates: 579717..583109 (-)
• Length: 1130 a.a.
• NCBI ID: WP_026028236.1
• Uniprot ID: A0A233HLW7
• Organism: Vibrio anguillarum strain VIB12 isolate Sea bass
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 574717..588109

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CMV05_RS02795 (CMV05_02795)	-	575121..576146 (-)	1026	WP_013857641.1	ABC transporter permease	-
CMV05_RS02800 (CMV05_02800)	-	576149..577135 (-)	987	WP_013857640.1	ABC transporter permease	-
CMV05_RS02805 (CMV05_02805)	-	577302..578972 (-)	1671	WP_096036014.1	ABC transporter substrate-binding protein	-
CMV05_RS02810 (CMV05_02810)	chiS	579717..583109 (-)	3393	WP_026028236.1	response regulator	Regulator
CMV05_RS02815 (CMV05_02815)	rsmC	583309..584352 (-)	1044	WP_047690089.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
CMV05_RS02820 (CMV05_02820)	-	584436..585521 (-)	1086	WP_096036015.1	AI-2E family transporter	-
CMV05_RS02825 (CMV05_02825)	hemL	585799..587094 (-)	1296	WP_094164258.1	glutamate-1-semialdehyde 2,1-aminomutase	-
CMV05_RS02830 (CMV05_02830)	erpA	587417..587758 (+)	342	WP_026027518.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1130 a.a.
• Molecular weight: 127823.51 Da
• Isoelectric Point: 6.2690

>NTDB_id=245863 CMV05_RS02810 WP_026028236.1 579717..583109(-) (chiS) [Vibrio anguillarum strain VIB12 isolate Sea bass]
MFRFSRKQKFKRLQNTLMLAFLVLSITPLTVTAIFFLQSHTKDLQEQSTSHLLSVRDTKQQQVLDYLTAKESEVMGFVRS
ELAYASGGRFYGLVNAFQRLGLDIDQAREHAQQRYIPGSGDQIKTSILPQSSSYVGSERYRLLHKRYHWAYLELLKRSDF
DDILLVDLDGDVVYSVYKHDNYGTNLLTGKYKDSNLGKTFRQLEQQVGEQRKINEEYTPVIISDFSQQEGQSVAWLGAPI
IQQGYLHSYAMFRLPNNGITKLVADTNATSQIRTLLVGQDHHSRILSYTQQEIETSQKVINLALSGLSAVGTYTNTLNEK
TIAAYAPVANKNINWALVVEIPEKEAYARVHQLEKLFIFAMLTAIILVVIASHYLSNFITSPLLKLTWAAEKVSAGDLDE
NVINTDRKDEIGRLAVSFERMQRSIREKMQLIKAQNKELESNIQLIRKQNDELHLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGSSGTITADHRYQLGIIISSGQRLTNLVDDLLDYHKMRYGSLDIKQCAVDLSGATRLVLELSNHLLNKKPIRV
INQIPDECIWVSADPQRLEQVLYNLVGNAIKYTTEGKIVISANVVDDKIRVQVVDTGQGIPAEQLEHIFEPLIQAGQDAS
RYRQGAGLGLSISRQLIELMQGTLYVSSQPMVGTTFSFTLPLASKAEIESTSYMEAGHFQSPTISDIELPEMHSLPENKE
GPVLLIADDEPVNLRVLDSFLRLEGYQVRTAKDGNEVISAVEKEKPELLLLDIMMPGLSGYQVCEKLRETYDHAELPIIM
LTALNQTDDRVRGFAAGANDYLSKPFNKQELAARITAHLTASKAEQRRIENNQLQQELKHRAMVEASLLETQGRLLEQLE
SAPEAIICIRDDHKIRFANEAAARLFKRSQEQLKRSNAEELIAPKYLVVEQEHYCGNIDIYVEDTRQHMSADVLRLPDGS
GLQAMYIFNVGGNINAARINNLETAIEALSSYAFEGDKEKLQQLKELGGEFTRIADKVSGESQSKQDLMREVLVEAMTSA
LDYWERVSNQSKFTFAEQSGLWRVYLDRSTLQTRTLDKYLRIETLPKTPRWRTVLNSLDYILDHCQEHGPERSHIEAQRD
KLQKLLTSSL

Nucleotide

• Length: 3393 bp

>NTDB_id=245863 CMV05_RS02810 WP_026028236.1 579717..583109(-) (chiS) [Vibrio anguillarum strain VIB12 isolate Sea bass]
ATGTTTAGGTTCTCTCGTAAGCAAAAATTTAAGCGCCTGCAAAATACTCTTATGCTGGCTTTTCTCGTTTTGAGCATCAC
GCCTTTAACTGTGACTGCCATTTTTTTTCTGCAATCACACACTAAAGATCTTCAAGAACAAAGCACGTCTCACTTATTGT
CAGTCAGAGACACTAAGCAACAGCAAGTTCTCGATTACCTCACGGCCAAAGAATCAGAAGTGATGGGGTTTGTCCGTTCA
GAGTTAGCTTATGCTAGTGGGGGGCGCTTTTACGGCTTAGTCAATGCGTTCCAAAGACTTGGTCTGGATATTGATCAAGC
TCGTGAGCATGCCCAGCAGCGTTATATTCCTGGCTCTGGTGATCAGATAAAAACGTCAATATTGCCACAATCGAGCAGCT
ATGTAGGCAGTGAACGGTATCGCCTACTGCACAAACGCTATCATTGGGCGTATTTAGAACTGCTTAAACGTTCTGATTTT
GACGATATTTTACTGGTGGATCTCGATGGTGATGTCGTTTATTCCGTTTATAAGCACGACAACTATGGGACGAATTTACT
GACCGGAAAATACAAAGATAGCAATCTAGGTAAAACATTCCGCCAGTTAGAGCAGCAAGTTGGCGAACAACGAAAAATCA
ATGAAGAATATACACCAGTCATTATTTCTGACTTTTCACAACAAGAAGGGCAATCAGTTGCTTGGCTTGGCGCGCCCATT
ATTCAACAGGGCTACCTGCACAGCTACGCCATGTTCCGCCTACCAAACAATGGCATCACAAAGCTCGTTGCTGACACCAA
TGCGACATCGCAAATAAGGACTTTACTCGTCGGGCAAGATCATCATTCTCGAATACTCTCTTACACGCAGCAAGAAATCG
AGACTAGTCAAAAAGTGATCAATCTTGCGCTTTCTGGGTTGAGTGCCGTTGGTACTTACACCAATACATTGAATGAGAAA
ACCATTGCCGCCTATGCACCTGTTGCAAACAAAAACATCAATTGGGCCTTGGTCGTAGAGATACCAGAAAAAGAGGCTTA
TGCGCGAGTTCATCAGCTTGAGAAGTTATTTATTTTCGCCATGCTAACCGCGATTATTTTAGTCGTCATCGCTTCACATT
ATCTCTCTAATTTTATTACCTCTCCCCTACTGAAGCTCACTTGGGCGGCAGAAAAAGTCTCAGCTGGGGATTTAGATGAA
AATGTTATCAATACCGATCGTAAAGATGAGATTGGTCGACTCGCAGTGAGTTTTGAACGTATGCAGCGTTCAATCCGAGA
AAAAATGCAGCTGATTAAAGCGCAAAATAAAGAGCTCGAAAGCAACATTCAATTAATCCGCAAACAGAACGATGAGTTGC
ATCTCGCTAACAAACTAAAAGATGAATTCCTAGCCACAACGTCACATGAATTAAGAACACCGCTACACGGTATGGTCGGT
ATTGCAGAAGCACTGATCTCTGGGTCAAGTGGAACTATCACCGCCGATCATCGTTATCAATTGGGCATAATCATCAGCAG
TGGACAACGGCTGACAAACTTGGTCGATGACTTACTCGATTACCATAAAATGCGCTATGGCAGCTTGGATATCAAACAGT
GTGCTGTTGATCTATCCGGCGCAACACGCTTAGTGTTAGAGCTGTCTAACCATCTACTCAACAAAAAGCCCATTCGCGTA
ATAAACCAAATCCCTGATGAATGTATTTGGGTCTCTGCCGATCCACAACGATTAGAGCAAGTGCTTTATAACCTTGTAGG
AAACGCCATTAAATATACGACTGAAGGGAAAATTGTCATTTCAGCCAATGTGGTTGATGACAAGATTCGTGTCCAAGTTG
TCGATACGGGGCAAGGCATTCCTGCTGAACAACTTGAACACATCTTCGAACCACTGATTCAAGCAGGGCAAGATGCTAGT
CGTTATCGACAAGGCGCAGGCTTGGGCCTTTCGATCAGCCGTCAATTGATCGAATTAATGCAAGGAACGCTTTATGTCAG
TAGCCAACCGATGGTCGGTACGACATTCAGCTTTACCTTACCATTAGCATCAAAAGCGGAAATTGAGTCGACAAGCTATA
TGGAAGCTGGCCATTTCCAATCTCCGACCATTTCAGACATTGAACTGCCTGAAATGCATTCACTACCTGAAAATAAAGAA
GGCCCAGTGCTACTGATAGCAGATGATGAACCCGTCAATCTGCGTGTCCTAGACAGCTTCCTACGTTTAGAAGGCTATCA
AGTCCGCACCGCTAAAGATGGCAATGAAGTCATTAGCGCGGTCGAAAAAGAAAAACCGGAACTTCTACTGCTCGACATTA
TGATGCCAGGATTAAGCGGCTACCAAGTCTGTGAAAAGTTAAGAGAAACATACGATCATGCCGAGCTACCTATCATTATG
TTGACGGCATTAAATCAAACTGACGATAGAGTTCGTGGTTTTGCAGCGGGAGCGAACGATTACTTATCGAAACCTTTTAA
TAAGCAAGAGCTCGCTGCACGTATTACGGCGCATTTAACGGCCAGCAAAGCTGAACAAAGACGTATTGAGAACAACCAAC
TGCAACAAGAGCTGAAGCATAGAGCAATGGTAGAGGCCAGTTTATTGGAAACCCAAGGCCGTCTACTAGAGCAGCTTGAA
TCTGCTCCTGAGGCCATTATTTGCATTCGAGACGATCATAAAATCCGCTTTGCGAACGAAGCGGCTGCTCGGTTATTTAA
GCGCAGCCAAGAACAACTAAAGCGCTCAAATGCGGAAGAACTCATCGCCCCCAAATACTTAGTCGTCGAGCAAGAGCATT
ACTGCGGCAATATCGATATCTATGTCGAAGATACACGTCAGCATATGTCTGCTGATGTGTTACGACTACCGGATGGCTCT
GGGTTGCAGGCTATGTACATCTTTAACGTAGGTGGAAACATCAATGCAGCGCGCATCAATAACCTTGAAACCGCTATTGA
AGCGCTATCCAGTTACGCATTTGAAGGCGATAAAGAAAAACTGCAGCAGCTCAAAGAACTCGGTGGCGAGTTCACTCGTA
TCGCCGACAAAGTATCGGGAGAGAGTCAATCTAAGCAAGATTTAATGCGCGAAGTACTGGTTGAAGCAATGACCAGTGCT
TTAGATTACTGGGAACGGGTCAGTAACCAAAGCAAGTTTACCTTTGCAGAGCAGAGTGGGCTATGGCGAGTGTATCTCGA
TAGAAGCACATTACAGACTCGGACACTAGACAAGTACTTACGTATCGAGACACTGCCTAAAACACCTCGCTGGCGTACCG
TTCTTAATTCGTTAGATTACATTCTTGATCATTGTCAGGAGCACGGCCCTGAACGCTCTCACATCGAAGCGCAGCGCGAT
AAATTGCAAAAGCTACTGACCTCATCACTCTAA

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (375-427)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Response regulator receiver domain (Response_reg) (725-835)

• PAS fold (PAS) (876-926)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

3D structure

• AlphaFold DB: A0A233HLW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	81.649	99.823	0.815