Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   CLM74_RS16470 Genome accession   NZ_CP023271
Coordinates   3589084..3589485 (-) Length   133 a.a.
NCBI ID   WP_005418455.1    Uniprot ID   -
Organism   Stenotrophomonas sp. MYb57     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3584084..3594485
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CLM74_RS16455 (CLM74_16395) - 3586095..3588131 (-) 2037 WP_033831799.1 methyl-accepting chemotaxis protein -
  CLM74_RS16460 (CLM74_16400) - 3588173..3588703 (-) 531 WP_025877750.1 chemotaxis protein CheW -
  CLM74_RS16465 (CLM74_16405) - 3588703..3589065 (-) 363 WP_025877749.1 response regulator -
  CLM74_RS16470 (CLM74_16410) pilG 3589084..3589485 (-) 402 WP_005418455.1 twitching motility response regulator PilG Regulator
  CLM74_RS16475 (CLM74_16415) gshB 3589726..3590673 (+) 948 WP_049466293.1 glutathione synthase -
  CLM74_RS16480 (CLM74_16420) - 3590673..3591557 (+) 885 WP_025877745.1 energy transducer TonB -
  CLM74_RS16485 (CLM74_16425) tsaB 3592090..3592803 (-) 714 WP_025877742.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14657.98 Da        Isoelectric Point: 6.3483

>NTDB_id=245653 CLM74_RS16470 WP_005418455.1 3589084..3589485(-) (pilG) [Stenotrophomonas sp. MYb57]
MTENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=245653 CLM74_RS16470 WP_005418455.1 3589084..3589485(-) (pilG) [Stenotrophomonas sp. MYb57]
ATGACTGAAAACACGACTGCGGGCGGGGAGCTCGCAGGACTCCGGGTGATGGTCATCGATGACTCGAAGACCATCCGCAG
GACTGCGGAAACACTGCTGAAGCGCGAAGGCTGCGAAGTAGTGACCGCGACGGACGGTTTCGAGGCCCTGGCCAAGATTG
CCGACCAGCAGCCGCAGATCATCTTCGTCGACATCATGATGCCGCGCCTGGATGGCTACCAGACCTGCGCACTGATCAAG
GGTAACCAGCTGTTCAAGGCGACCCCGGTGATCATGCTGTCGTCCAAGGATGGTCTGTTCGACAAGGCGCGGGGGCGCAT
CGTCGGCTCGGAGCAATACCTGACCAAGCCATTCACGCGCGAAGAACTGCTGGGTGCCATCCGCACGTACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677

Multiple sequence alignment