Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   CLD04_RS21935 Genome accession   NZ_CP023257
Coordinates   443176..443316 (+) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus subtilis strain TLO3     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 438176..448316
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CLD04_RS22290 (CLD04_02400) - 438501..440030 (+) 1530 WP_284690533.1 condensation domain-containing protein -
  CLD04_RS21930 srfAB 440043..443132 (+) 3090 Protein_431 surfactin non-ribosomal peptide synthetase SrfAB -
  CLD04_RS21935 comS 443176..443316 (+) 141 WP_010886404.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=245585 CLD04_RS21935 WP_010886404.1 443176..443316(+) (comS) [Bacillus subtilis strain TLO3]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=245585 CLD04_RS21935 WP_010886404.1 443176..443316(+) (comS) [Bacillus subtilis strain TLO3]
TTGAACCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment