Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | CLD04_RS00250 | Genome accession | NZ_CP023257 |
| Coordinates | 44545..44835 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis strain TLO3 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 39545..49835
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CLD04_RS00210 (CLD04_00210) | darA | 39568..39897 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| CLD04_RS00215 (CLD04_00215) | yaaR | 39910..40350 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| CLD04_RS00220 (CLD04_00220) | holB | 40362..41351 (+) | 990 | WP_003226770.1 | DNA polymerase III subunit delta' | - |
| CLD04_RS00225 (CLD04_00225) | ricT | 41354..42181 (+) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| CLD04_RS00230 (CLD04_00230) | yabA | 42196..42555 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| CLD04_RS00235 (CLD04_00235) | trmNF | 42614..43357 (+) | 744 | WP_003244526.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| CLD04_RS00240 (CLD04_00240) | yazA | 43344..43643 (+) | 300 | WP_003242983.1 | GIY-YIG nuclease family protein | - |
| CLD04_RS00245 (CLD04_00245) | rsmI | 43618..44496 (+) | 879 | WP_087961215.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| CLD04_RS00250 (CLD04_00250) | abrB | 44545..44835 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| CLD04_RS00255 (CLD04_00255) | metG | 45329..47323 (+) | 1995 | WP_095843381.1 | methionine--tRNA ligase | - |
| CLD04_RS00260 (CLD04_00260) | dayD | 47402..48169 (+) | 768 | WP_095843382.1 | TatD family hydrolase | - |
| CLD04_RS00265 (CLD04_00265) | yabE | 48325..49638 (+) | 1314 | WP_095843383.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=245511 CLD04_RS00250 WP_003226760.1 44545..44835(-) (abrB) [Bacillus subtilis strain TLO3]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=245511 CLD04_RS00250 WP_003226760.1 44545..44835(-) (abrB) [Bacillus subtilis strain TLO3]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTCTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGA
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTCTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGA
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |