Detailed information NTG0245433

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: YA91_RS22175
• Genome accession: NZ_CP023248
• Coordinates: 2997943..2998989 (+)
• Length: 348 a.a.
• NCBI ID: WP_254894148.1
• Uniprot ID: -
• Organism: Vibrio parahaemolyticus strain MAVP-26
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2992943..3003989

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
YA91_RS22155 (YA91_23650)	rplC	2993516..2994145 (-)	630	WP_005456132.1	50S ribosomal protein L3	-
YA91_RS22160 (YA91_23655)	rpsJ	2994160..2994471 (-)	312	WP_004410492.1	30S ribosomal protein S10	-
YA91_RS22165 (YA91_23660)	rpmE	2994929..2995150 (-)	222	WP_005457203.1	50S ribosomal protein L31	-
YA91_RS22170 (YA91_23665)	priA	2995445..2997649 (+)	2205	WP_005496931.1	primosomal protein N'	-
YA91_RS22175 (YA91_23670)	cytR	2997943..2998989 (+)	1047	WP_254894148.1	DNA-binding transcriptional regulator CytR	Regulator
YA91_RS22180 (YA91_23675)	ftsN	2999165..2999710 (+)	546	WP_005496929.1	cell division protein FtsN	-
YA91_RS22185 (YA91_23680)	hslV	2999874..3000425 (+)	552	WP_005489705.1	ATP-dependent protease subunit HslV	-
YA91_RS22190 (YA91_23685)	hslU	3000449..3001780 (+)	1332	WP_005489452.1	HslU--HslV peptidase ATPase subunit	-
YA91_RS22195 (YA91_23690)	-	3001965..3002882 (+)	918	WP_005457195.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
YA91_RS22200 (YA91_23695)	rraA	3002959..3003471 (+)	513	WP_005457192.1	ribonuclease E activity regulator RraA	-
YA91_RS22205 (YA91_23700)	zapB	3003576..3003818 (-)	243	WP_005481417.1	cell division protein ZapB	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38445.17 Da
• Isoelectric Point: 6.7430

>NTDB_id=245433 YA91_RS22175 WP_254894148.1 2997943..2998989(+) (cytR) [Vibrio parahaemolyticus strain MAVP-26]
MTSSWQKFERLNTMATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVP
DICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEF
APELELPTVHIDNLTSAFEAVNYLTQLGHKRIAQISGPDTAVLCQFRQQGYQQALRRAGISKDPQYSVITEFSFDGGAKA
VRKLLELPEPPTAIFCHCDTMAIGAIQEAKRLGLRVPQDLSVVGFDDINFAQYCDPPLTTISQPRYEIGRQAMLMMLELL
KGHDVHSGSRLLETKLVVRGSAAPPQRA

Nucleotide

• Length: 1047 bp

>NTDB_id=245433 YA91_RS22175 WP_254894148.1 2997943..2998989(+) (cytR) [Vibrio parahaemolyticus strain MAVP-26]
ATAACGTCATCTTGGCAAAAATTTGAGAGGTTAAACACTATGGCGACAATGAAGGATGTTGCCCAGCTTGCGGGAGTGTC
GACAGCTACGGTATCTCGAGCATTAATGAATCCAGAAAAAGTCTCTTCTTCAACAAGAAAAAGAGTCGAAGATGCCGTCC
TTGAAGCGGGCTATTCTCCAAATTCATTAGCGCGTAATCTACGTAGAAACGAATCAAAAACGATTGTTACCATCGTTCCT
GACATCTGTGATCCTTACTTTTCTGAAATCATTCGTGGTATCGAAGACGCAGCTATGGAACATGGCTACCTCGTACTACT
CGGTGACAGCGGCCAGCAGAAAAAGCGTGAAAGCTCGTTTGTGAATCTAGTGTTCACCAAACAAGCCGATGGCATGTTAC
TGCTTGGCACCGACCTGCCATTTGATGTCAGCAAGCCAGAACAGAAAAACCTGCCACCAATGGTCATGGCTTGTGAGTTT
GCGCCAGAGCTAGAATTACCAACCGTGCACATTGACAACCTAACGTCTGCTTTTGAAGCGGTCAATTACCTAACTCAACT
TGGCCATAAACGCATAGCACAAATTTCAGGGCCAGACACAGCGGTATTGTGCCAGTTCCGCCAGCAAGGTTATCAACAAG
CCTTGCGTCGCGCGGGGATCAGTAAAGACCCACAATACAGCGTTATCACTGAGTTTTCTTTTGACGGCGGCGCGAAAGCT
GTACGTAAGTTGCTAGAACTTCCAGAGCCACCAACTGCGATTTTCTGCCACTGTGACACCATGGCAATCGGCGCAATCCA
AGAAGCGAAACGACTCGGTCTGCGCGTTCCGCAAGATCTGTCAGTGGTTGGTTTCGATGATATCAACTTTGCTCAATACT
GCGATCCACCGTTAACAACCATTTCTCAACCTCGTTATGAAATTGGCCGCCAAGCGATGCTTATGATGCTTGAACTCCTG
AAAGGCCATGACGTTCATTCAGGTTCACGCTTACTAGAAACTAAGCTTGTTGTCCGTGGTAGCGCAGCGCCACCGCAACG
CGCCTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (181-341)

• Bacterial regulatory proteins, lacI family (LacI) (16-61)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	100	100	1
cytR	Vibrio cholerae C6706	90.719	95.977	0.871