Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | YA91_RS09770 | Genome accession | NZ_CP023248 |
| Coordinates | 331575..332090 (+) | Length | 171 a.a. |
| NCBI ID | WP_005454781.1 | Uniprot ID | A0A646LMN6 |
| Organism | Vibrio parahaemolyticus strain MAVP-26 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 326575..337090
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| YA91_RS09750 (YA91_10355) | - | 326708..329278 (-) | 2571 | WP_005496567.1 | PBP1A family penicillin-binding protein | - |
| YA91_RS09755 (YA91_10360) | pilM | 329421..330437 (+) | 1017 | WP_005496568.1 | type IV pilus assembly protein PilM | Machinery gene |
| YA91_RS09760 (YA91_10365) | pilN | 330421..330999 (+) | 579 | WP_005496569.1 | PilN domain-containing protein | Machinery gene |
| YA91_RS09765 (YA91_10370) | pilO | 330992..331585 (+) | 594 | WP_005496571.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| YA91_RS09770 (YA91_10375) | pilP | 331575..332090 (+) | 516 | WP_005454781.1 | pilus assembly protein PilP | Machinery gene |
| YA91_RS09775 (YA91_10380) | pilQ | 332122..333870 (+) | 1749 | WP_005488227.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| YA91_RS09780 (YA91_10385) | aroK | 334059..334577 (+) | 519 | WP_005381319.1 | shikimate kinase AroK | - |
| YA91_RS09785 (YA91_10390) | aroB | 334609..335709 (+) | 1101 | WP_005496576.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 18844.96 Da Isoelectric Point: 10.4351
>NTDB_id=245405 YA91_RS09770 WP_005454781.1 331575..332090(+) (pilP) [Vibrio parahaemolyticus strain MAVP-26]
MGNKSLLTVLVSALLVGCQANDESLTDFIRGVESQARRDVEKLKPSDKYIAVAYAPEVMRAPFELPKEATIATQPVARKD
CWQPPNRARSGKLEKFPLSQLRLKGVMGMGNTVSGLVQAPNGTVYKVKPGQYLGRNNGKVTHVTHSYLLINETLPDGLGC
WQKRKVKLALR
MGNKSLLTVLVSALLVGCQANDESLTDFIRGVESQARRDVEKLKPSDKYIAVAYAPEVMRAPFELPKEATIATQPVARKD
CWQPPNRARSGKLEKFPLSQLRLKGVMGMGNTVSGLVQAPNGTVYKVKPGQYLGRNNGKVTHVTHSYLLINETLPDGLGC
WQKRKVKLALR
Nucleotide
Download Length: 516 bp
>NTDB_id=245405 YA91_RS09770 WP_005454781.1 331575..332090(+) (pilP) [Vibrio parahaemolyticus strain MAVP-26]
ATGGGAAATAAATCTTTGCTGACGGTGTTGGTAAGCGCTCTATTGGTCGGGTGCCAGGCGAATGATGAATCATTAACGGA
TTTTATTCGTGGTGTTGAGAGCCAGGCTAGGCGAGATGTGGAGAAGCTCAAACCTTCTGACAAATACATCGCAGTGGCGT
ATGCCCCAGAAGTGATGCGTGCTCCTTTCGAATTGCCCAAAGAGGCGACCATCGCGACTCAACCTGTGGCGAGAAAAGAT
TGTTGGCAACCGCCGAACCGAGCGAGATCTGGCAAGTTAGAAAAATTCCCACTCAGCCAACTTCGTTTAAAAGGAGTGAT
GGGTATGGGGAACACCGTTTCTGGTTTAGTACAAGCCCCGAATGGCACGGTTTACAAAGTGAAACCAGGTCAATACCTCG
GGCGTAATAACGGTAAGGTCACCCATGTTACCCACTCCTATTTGTTGATTAATGAAACCTTGCCCGATGGTTTGGGGTGC
TGGCAAAAACGTAAAGTTAAGTTGGCTTTGAGATAG
ATGGGAAATAAATCTTTGCTGACGGTGTTGGTAAGCGCTCTATTGGTCGGGTGCCAGGCGAATGATGAATCATTAACGGA
TTTTATTCGTGGTGTTGAGAGCCAGGCTAGGCGAGATGTGGAGAAGCTCAAACCTTCTGACAAATACATCGCAGTGGCGT
ATGCCCCAGAAGTGATGCGTGCTCCTTTCGAATTGCCCAAAGAGGCGACCATCGCGACTCAACCTGTGGCGAGAAAAGAT
TGTTGGCAACCGCCGAACCGAGCGAGATCTGGCAAGTTAGAAAAATTCCCACTCAGCCAACTTCGTTTAAAAGGAGTGAT
GGGTATGGGGAACACCGTTTCTGGTTTAGTACAAGCCCCGAATGGCACGGTTTACAAAGTGAAACCAGGTCAATACCTCG
GGCGTAATAACGGTAAGGTCACCCATGTTACCCACTCCTATTTGTTGATTAATGAAACCTTGCCCGATGGTTTGGGGTGC
TGGCAAAAACGTAAAGTTAAGTTGGCTTTGAGATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Vibrio campbellii strain DS40M4 |
83.041 |
100 |
0.83 |
| pilP | Vibrio cholerae strain A1552 |
58.14 |
100 |
0.585 |