Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | CJ306_RS10010 | Genome accession | NZ_CP023245 |
| Coordinates | 1926055..1926342 (+) | Length | 95 a.a. |
| NCBI ID | WP_000648324.1 | Uniprot ID | - |
| Organism | Bacillus cereus strain HBL-AI | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1921055..1931342
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CJ306_RS09990 (CJ306_10235) | - | 1922225..1922422 (+) | 198 | WP_098381476.1 | DUF4083 domain-containing protein | - |
| CJ306_RS09995 (CJ306_10240) | - | 1922454..1922915 (+) | 462 | WP_000024992.1 | NUDIX hydrolase | - |
| CJ306_RS10000 (CJ306_10245) | nadE | 1922965..1923783 (-) | 819 | WP_000174896.1 | ammonia-dependent NAD(+) synthetase | - |
| CJ306_RS10005 (CJ306_10250) | - | 1924058..1925938 (+) | 1881 | WP_063536141.1 | ABC transporter permease | - |
| CJ306_RS10010 (CJ306_10255) | abrB | 1926055..1926342 (+) | 288 | WP_000648324.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| CJ306_RS10015 (CJ306_10260) | - | 1926618..1927565 (+) | 948 | WP_000099761.1 | serine protease | - |
| CJ306_RS10020 (CJ306_10265) | - | 1927607..1927915 (-) | 309 | WP_119683204.1 | helix-turn-helix transcriptional regulator | - |
| CJ306_RS10025 (CJ306_10270) | - | 1928022..1928957 (+) | 936 | WP_119683205.1 | aldo/keto reductase | - |
| CJ306_RS10030 (CJ306_10275) | - | 1929005..1930180 (+) | 1176 | WP_048655667.1 | MFS transporter | - |
| CJ306_RS31855 (CJ306_10280) | - | 1930229..1930435 (+) | 207 | WP_001101741.1 | hypothetical protein | - |
| CJ306_RS10040 (CJ306_10285) | - | 1930579..1930941 (+) | 363 | WP_001198796.1 | DUF805 domain-containing protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10587.32 Da Isoelectric Point: 4.8408
>NTDB_id=245366 CJ306_RS10010 WP_000648324.1 1926055..1926342(+) (abrB) [Bacillus cereus strain HBL-AI]
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEADKIILQKYQPYNACQITGDVSEQNISLANGNITVGIEGAE
YLVKEIEKFLNKSEV
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEADKIILQKYQPYNACQITGDVSEQNISLANGNITVGIEGAE
YLVKEIEKFLNKSEV
Nucleotide
Download Length: 288 bp
>NTDB_id=245366 CJ306_RS10010 WP_000648324.1 1926055..1926342(+) (abrB) [Bacillus cereus strain HBL-AI]
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATCCCTAAAGAATTACGCGATGTATTGGG
AATACAAATCAAATCACCGCTTGAAATTTTTGTAGAAGCAGATAAAATCATTTTACAAAAATATCAACCTTACAATGCTT
GCCAAATCACAGGTGATGTTTCAGAGCAGAACATATCATTAGCAAATGGAAATATTACTGTTGGGATAGAGGGAGCGGAA
TATTTAGTAAAAGAAATAGAAAAGTTTTTAAACAAGAGTGAGGTTTAG
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATCCCTAAAGAATTACGCGATGTATTGGG
AATACAAATCAAATCACCGCTTGAAATTTTTGTAGAAGCAGATAAAATCATTTTACAAAAATATCAACCTTACAATGCTT
GCCAAATCACAGGTGATGTTTCAGAGCAGAACATATCATTAGCAAATGGAAATATTACTGTTGGGATAGAGGGAGCGGAA
TATTTAGTAAAAGAAATAGAAAAGTTTTTAAACAAGAGTGAGGTTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
55.556 |
94.737 |
0.526 |