Detailed information NTG0245300

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: CLI14_RS01465
• Genome accession: NZ_CP023208
• Coordinates: 320452..321459 (+)
• Length: 335 a.a.
• NCBI ID: WP_013855849.1
• Uniprot ID: A0AAW4B9N4
• Organism: Vibrio anguillarum strain ATCC-68554
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 315452..326459

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CLI14_RS01445 (CLI14_01445)	metJ	315503..315829 (+)	327	WP_010318342.1	met regulon transcriptional regulator MetJ	-
CLI14_RS01450 (CLI14_01450)	-	315978..317255 (-)	1278	WP_026027888.1	malic enzyme-like NAD(P)-binding protein	-
CLI14_RS01455 (CLI14_01455)	rpmE	317461..317676 (-)	216	WP_010318344.1	50S ribosomal protein L31	-
CLI14_RS01460 (CLI14_01460)	priA	317945..320146 (+)	2202	WP_013855848.1	primosomal protein N'	-
CLI14_RS01465 (CLI14_01465)	cytR	320452..321459 (+)	1008	WP_013855849.1	DNA-binding transcriptional regulator CytR	Regulator
CLI14_RS01470 (CLI14_01470)	-	321562..322104 (+)	543	WP_013855850.1	SPOR domain-containing protein	-
CLI14_RS01475 (CLI14_01475)	hslV	322225..322791 (+)	567	WP_010317615.1	ATP-dependent protease subunit HslV	-
CLI14_RS01480 (CLI14_01480)	hslU	322827..324158 (+)	1332	WP_013855851.1	HslU--HslV peptidase ATPase subunit	-
CLI14_RS01485 (CLI14_01485)	-	324281..325198 (+)	918	WP_013855852.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
CLI14_RS01490 (CLI14_01490)	rraA	325275..325796 (+)	522	WP_026027418.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36797.43 Da
• Isoelectric Point: 6.6397

>NTDB_id=245300 CLI14_RS01465 WP_013855849.1 320452..321459(+) (cytR) [Vibrio anguillarum strain ATCC-68554]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYFTEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSLVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPAEATLCKFRHQGYQQALRRAGITMNPNYCTYGDFTFEAGAKALRQLLALSEPPTA
IFSHNDSMAIGVIKEAKKLGLRVPQDISVVGFDDIQFALYCDPPLTTISQPRYEIGRQAMLMMLDLLRGQEVGAGSRLLE
TKLVIRESAAPPRLN

Nucleotide

• Length: 1008 bp

>NTDB_id=245300 CLI14_RS01465 WP_013855849.1 320452..321459(+) (cytR) [Vibrio anguillarum strain ATCC-68554]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGTGTATCAACCGCCACGGTATCTAGGGCGTTGATGAACCCTGAAAA
AGTATCATCTTCAACGCGAAAGCGTGTCGAAGATGCTGTTTTGGAAGCTGGTTACTCACCAAATTCTCTCGCTCGCAACT
TACGCCGTAATGAATCTAAAACCATTGTCGCTATCGTGCCTGATATTTGTGACCCTTACTTCACAGAGATCATTCGTGGT
ATCGAAGATGCGGCGATGGAACATGGTTATTTAGTACTGTTGGGTGATAGTGGTCAGCAGAAAAAGCGAGAAAGTTCGTT
AGTTAACCTCGTATTTACTAAGCAGGCCGATGGCATGTTGTTGCTGGGAACTGATTTGCCGTTTGATGTTAGTAAGCCGG
AGCAAAAAAACCTGCCACCTATGGTTATGGCATGTGAATTTGCGCCAGAACTTGAGTTGCCGACGGTACATATTGATAAC
CTTACTTCAGCGTTTGAAGCGGTGAACTATTTGACGCAGCTCGGGCACAAACGCATCGCGCAAATATCGGGGCCAGCAGA
GGCCACGCTGTGTAAGTTCCGCCATCAAGGTTATCAACAAGCTTTACGCCGCGCAGGAATTACCATGAACCCTAATTATT
GCACTTATGGTGATTTTACTTTTGAAGCCGGGGCTAAAGCACTGCGCCAATTATTGGCGTTATCTGAGCCACCCACAGCC
ATTTTTAGTCATAATGACAGTATGGCTATCGGTGTCATTAAAGAAGCCAAAAAATTGGGTTTGCGCGTTCCACAAGATAT
TTCAGTGGTGGGATTTGATGATATTCAATTTGCGCTCTACTGCGATCCACCGTTAACGACCATCTCACAGCCGCGCTATG
AGATAGGGCGTCAAGCGATGCTCATGATGCTCGATCTTCTTCGCGGTCAAGAGGTTGGCGCAGGTTCTCGACTATTAGAA
ACCAAGTTAGTGATTCGAGAAAGCGCAGCGCCTCCTCGTTTGAACTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	92.169	99.104	0.913
cytR	Vibrio parahaemolyticus RIMD 2210633	87.387	99.403	0.869