Detailed information NTG0245118

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: CK945_RS14930
• Genome accession: NZ_CP023168
• Coordinates: 2876295..2877359 (-)
• Length: 354 a.a.
• NCBI ID: WP_025811157.1
• Uniprot ID: -
• Organism: Bacillus paralicheniformis strain 14DA11
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2871295..2882359

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CK945_RS14905	-	2871344..2871766 (+)	423	WP_231124461.1	helix-turn-helix domain-containing protein	-
CK945_RS14910	-	2871962..2872462 (+)	501	WP_080624078.1	ImmA/IrrE family metallo-endopeptidase	-
CK945_RS14915	-	2872455..2873627 (+)	1173	WP_080624079.1	hypothetical protein	-
CK945_RS14920	-	2873674..2875206 (+)	1533	WP_167511160.1	recombinase family protein	-
CK945_RS14925	comGB	2875271..2876305 (-)	1035	WP_025811158.1	competence type IV pilus assembly protein ComGB	Machinery gene
CK945_RS14930	comGA	2876295..2877359 (-)	1065	WP_025811157.1	competence type IV pilus ATPase ComGA	Machinery gene
CK945_RS14935	-	2877517..2878356 (-)	840	WP_035338373.1	STAS domain-containing protein	-
CK945_RS14945	-	2878598..2878975 (-)	378	WP_003183482.1	Spx/MgsR family RNA polymerase-binding regulatory protein	-
CK945_RS14950	-	2879186..2879431 (+)	246	WP_020452180.1	DUF2626 domain-containing protein	-
CK945_RS14955	-	2879467..2880105 (-)	639	WP_020452181.1	MBL fold metallo-hydrolase	-
CK945_RS14960	-	2880261..2880434 (+)	174	WP_003183486.1	DUF2759 domain-containing protein	-
CK945_RS14965	-	2880495..2880809 (-)	315	WP_020452182.1	MTH1187 family thiamine-binding protein	-
CK945_RS14970	-	2880825..2881934 (-)	1110	WP_035338374.1	hypothetical protein	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 39797.28 Da
• Isoelectric Point: 9.1063

>NTDB_id=245118 CK945_RS14930 WP_025811157.1 2876295..2877359(-) (comGA) [Bacillus paralicheniformis strain 14DA11]
MYTIESLSGRLIDEAYRMKASDIHIVPGEKEAVVRFRIDDELFQKDRLTRNECSRLISHFKFLSSMDIGERRLPQSGALT
LYINRQPVHLRMSTLPTIHDESLVIRLLPKMSSKPLTKLSLFPSATFKLLSFLKHSHGLILFTGPTGSGKTTTLYSLIEY
AKRHFKRNIITLEDPVESRSENILQVQVNEKAGMTYSAGLKAVLRHDPDMIILGEIRDAETAQIAVRAALTGHLVLSSMH
AKNAKGAIYRLLEFGVDMTEIEQTLVAISAQRLVGLVCPFCGDSCSLYCRLSRPVRRASVFELLYGKSLNLCIEEAKGRC
GDIKTETLKTLIQKGIALGYLPSNTYERWIGHED

Nucleotide

• Length: 1065 bp

>NTDB_id=245118 CK945_RS14930 WP_025811157.1 2876295..2877359(-) (comGA) [Bacillus paralicheniformis strain 14DA11]
TTGTACACGATTGAATCATTAAGCGGAAGATTAATTGACGAGGCATATAGAATGAAGGCGTCAGACATTCATATTGTTCC
CGGTGAAAAAGAGGCGGTGGTTCGCTTCAGGATTGATGATGAACTTTTTCAAAAAGACAGATTAACGAGAAATGAGTGCT
CAAGGCTCATTTCTCACTTTAAATTCCTTTCTTCGATGGATATTGGGGAAAGACGGCTGCCGCAAAGCGGAGCTTTGACT
CTTTATATCAACCGTCAGCCCGTTCATTTAAGAATGTCCACTCTGCCCACCATCCATGATGAAAGCTTGGTCATCAGGCT
TCTTCCCAAGATGAGCAGCAAGCCGCTCACAAAGCTCTCATTGTTTCCGAGTGCAACATTCAAGCTGCTGTCTTTTCTGA
AGCATTCCCACGGATTAATTCTGTTCACCGGTCCGACAGGCTCGGGGAAAACGACAACACTCTATTCTTTAATCGAATAC
GCTAAGCGGCATTTTAAGCGAAACATCATTACCTTGGAAGACCCTGTTGAATCAAGAAGCGAAAACATTTTGCAAGTGCA
AGTAAACGAAAAAGCTGGCATGACTTATTCTGCGGGGTTGAAGGCGGTGCTTCGCCACGATCCGGACATGATCATCCTCG
GGGAAATTCGCGATGCCGAAACAGCCCAAATCGCAGTCAGGGCAGCTTTGACAGGACACCTTGTTTTATCGAGCATGCAT
GCGAAAAATGCCAAAGGCGCAATATACAGGCTGCTCGAGTTCGGCGTTGATATGACAGAAATTGAACAAACACTGGTCGC
AATCAGCGCCCAGCGCCTCGTCGGTCTCGTCTGCCCGTTTTGCGGCGACAGCTGCTCTTTATATTGCAGATTGTCGAGGC
CTGTGAGAAGAGCAAGCGTCTTCGAGCTTTTGTACGGAAAAAGCCTCAATCTCTGCATCGAAGAAGCAAAAGGCAGGTGC
GGTGACATAAAAACAGAAACTTTGAAAACGCTGATCCAGAAGGGAATAGCACTCGGATATCTGCCGTCGAATACTTATGA
ACGCTGGATAGGCCATGAAGATTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (11-274)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Bacillus subtilis subsp. subtilis str. 168	67.797	100	0.678
pilB	Vibrio cholerae strain A1552	38.671	93.503	0.362