Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   CK945_RS08950 Genome accession   NZ_CP023168
Coordinates   1713157..1713744 (+) Length   195 a.a.
NCBI ID   WP_020451209.1    Uniprot ID   A0A6I7TW81
Organism   Bacillus paralicheniformis strain 14DA11     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1708157..1718744
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CK945_RS08920 - 1708453..1708905 (+) 453 WP_020451204.1 flavodoxin -
  CK945_RS08925 dapD 1709012..1709722 (+) 711 WP_020451205.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  CK945_RS08930 - 1709792..1710916 (+) 1125 WP_096748077.1 N-acetyldiaminopimelate deacetylase -
  CK945_RS08935 - 1710979..1711224 (+) 246 WP_003181323.1 YkuS family protein -
  CK945_RS08940 ahpA 1711520..1712062 (+) 543 WP_020451207.1 biofilm-specific peroxidase AhpA -
  CK945_RS08945 - 1712152..1712610 (+) 459 WP_020451208.1 redoxin domain-containing protein -
  CK945_RS08950 rok 1713157..1713744 (+) 588 WP_020451209.1 transcriptional regulator Rok Regulator
  CK945_RS08955 - 1713889..1714845 (-) 957 WP_096748078.1 sporulation protein -
  CK945_RS08960 - 1714998..1715585 (+) 588 WP_023857285.1 molybdenum cofactor guanylyltransferase -
  CK945_RS08965 - 1715691..1716704 (+) 1014 WP_023857284.1 molybdopterin-synthase adenylyltransferase MoeB -
  CK945_RS08970 glp 1716723..1718015 (+) 1293 WP_035338847.1 gephyrin-like molybdotransferase Glp -
  CK945_RS08975 mobB 1717982..1718509 (+) 528 WP_020451214.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 195 a.a.        Molecular weight: 22537.49 Da        Isoelectric Point: 9.9960

>NTDB_id=245103 CK945_RS08950 WP_020451209.1 1713157..1713744(+) (rok) [Bacillus paralicheniformis strain 14DA11]
MFNEREALRLRLEQLNEAEVKVIREYQIERDNIYAKLRELDRPSSFNDTKKDFRPERKTESLPVLAELAAQEMKSYQQQQ
QQPQASQKNQQQTSPQTSSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGEISTETEQQ

Nucleotide


Download         Length: 588 bp        

>NTDB_id=245103 CK945_RS08950 WP_020451209.1 1713157..1713744(+) (rok) [Bacillus paralicheniformis strain 14DA11]
ATGTTTAACGAGAGGGAAGCATTGCGTTTAAGATTGGAGCAGCTGAATGAGGCTGAGGTTAAGGTGATTAGGGAGTATCA
AATTGAGCGGGATAATATATATGCAAAGCTGCGTGAATTGGATCGTCCATCCAGCTTTAATGATACAAAAAAAGATTTTC
GCCCGGAGCGTAAAACGGAATCTCTCCCTGTTTTAGCTGAATTAGCTGCGCAGGAGATGAAGAGCTATCAGCAACAACAG
CAGCAGCCGCAAGCATCTCAAAAGAACCAGCAGCAGACTTCTCCGCAAACCTCCTCACTGCCTGCCGGAATTCCAGATGG
AACGACAAGGCGCAGAAGGGGTACAGCACGTCCAGGCTCAAAAGCTGCAAAACTGCGTGAAGCGGCGATTAAAACATTAA
AACGCCATAATGCGGCCATCAAAAGCTCCGAACTTCAAAAAGAAATCGAAAAAGAGAGCGGACTTGAGATCCCTAATATG
ACAACCTTTATGCAAAGCCTGATTAAAATGTACCCGGAAGTCAAAAAACCATACCGCGGTCAATATATATTAGAGGGTGA
GATTTCTACCGAGACAGAGCAGCAATAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I7TW81

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

83.684

97.436

0.815

Multiple sequence alignment