Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   CK945_RS08840 Genome accession   NZ_CP023168
Coordinates   1697071..1697532 (-) Length   153 a.a.
NCBI ID   WP_003181285.1    Uniprot ID   A0A1Y0YEG4
Organism   Bacillus paralicheniformis strain 14DA11     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1692071..1702532
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CK945_RS08820 - 1692409..1693589 (-) 1181 Protein_1701 aminotransferase A -
  CK945_RS23565 - 1693781..1693939 (-) 159 WP_165389262.1 hypothetical protein -
  CK945_RS08825 - 1694111..1694635 (+) 525 WP_020451188.1 RDD family protein -
  CK945_RS08830 - 1694732..1696051 (+) 1320 WP_020451189.1 MFS transporter -
  CK945_RS08835 - 1696125..1697042 (+) 918 WP_020451190.1 chemotaxis protein -
  CK945_RS08840 kre 1697071..1697532 (-) 462 WP_003181285.1 YkyB family protein Regulator
  CK945_RS08845 - 1697674..1698975 (-) 1302 WP_096748073.1 MFS transporter -
  CK945_RS08850 - 1699064..1699561 (-) 498 WP_020451193.1 L,D-transpeptidase family protein -
  CK945_RS08855 - 1699739..1700596 (-) 858 WP_023857290.1 metallophosphoesterase -
  CK945_RS08860 fadH 1700743..1701507 (+) 765 WP_096748074.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17600.40 Da        Isoelectric Point: 10.6730

>NTDB_id=245102 CK945_RS08840 WP_003181285.1 1697071..1697532(-) (kre) [Bacillus paralicheniformis strain 14DA11]
MDDHNHTKELKPTVENLSKAIYTVNRHAKTATNPKYLYLLKKKALQKLLNEGKGKKVGLHFSKNPRFSQQQSDVLISLGD
YFFHMPPTKEDFANLPHLGTLNHSYRNPKAHMSLNIAKQLLQNYTGIKEKPLVTNRKRPASKPVFKKLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=245102 CK945_RS08840 WP_003181285.1 1697071..1697532(-) (kre) [Bacillus paralicheniformis strain 14DA11]
ATGGACGACCATAATCATACGAAAGAATTAAAACCGACAGTTGAAAACCTTTCAAAAGCGATTTATACAGTTAATCGCCA
TGCAAAAACCGCGACTAATCCCAAATACCTGTATCTTCTGAAAAAGAAAGCTTTGCAAAAGCTGCTTAATGAAGGAAAGG
GTAAAAAGGTAGGCCTTCACTTTTCGAAAAATCCAAGATTCAGCCAGCAGCAGTCAGATGTGCTGATTTCTCTCGGAGAC
TACTTTTTTCACATGCCTCCAACAAAAGAAGACTTCGCAAACCTTCCACACTTAGGTACATTAAATCATTCGTATCGGAA
CCCTAAAGCTCATATGTCCTTGAATATAGCGAAACAGCTTCTTCAAAACTACACGGGAATTAAGGAAAAACCGCTCGTCA
CAAACCGGAAGCGCCCTGCCTCAAAGCCCGTCTTCAAGAAGCTTGGCGAAAGCTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1Y0YEG4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

82.468

100

0.83

Multiple sequence alignment