Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | CK945_RS00600 | Genome accession | NZ_CP023168 |
| Coordinates | 107839..110271 (+) | Length | 810 a.a. |
| NCBI ID | WP_020449838.1 | Uniprot ID | A0A6I7TTL1 |
| Organism | Bacillus paralicheniformis strain 14DA11 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 102839..115271
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CK945_RS00585 | - | 105719..106183 (+) | 465 | WP_020449835.1 | CtsR family transcriptional regulator | - |
| CK945_RS00590 | - | 106198..106751 (+) | 554 | Protein_87 | UvrB/UvrC motif-containing protein | - |
| CK945_RS00595 | - | 106751..107842 (+) | 1092 | WP_023855926.1 | protein arginine kinase | - |
| CK945_RS00600 | clpC | 107839..110271 (+) | 2433 | WP_020449838.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| CK945_RS00605 | radA | 110351..111730 (+) | 1380 | WP_020449839.1 | DNA repair protein RadA | Machinery gene |
| CK945_RS00610 | disA | 111734..112810 (+) | 1077 | WP_020449840.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| CK945_RS00615 | - | 112942..114030 (+) | 1089 | WP_009330350.1 | PIN/TRAM domain-containing protein | - |
| CK945_RS00620 | ispD | 114047..114742 (+) | 696 | WP_020449841.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| CK945_RS00625 | ispF | 114735..115211 (+) | 477 | WP_020449842.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 810 a.a. Molecular weight: 90177.76 Da Isoelectric Point: 5.9547
>NTDB_id=245081 CK945_RS00600 WP_020449838.1 107839..110271(+) (clpC) [Bacillus paralicheniformis strain 14DA11]
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLSPDKIQKEVESLIGRGQEMSQSIHY
TPRAKKVTELAMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESGGAASGANSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSPEESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEETKKTWKEKQGQENSEVTVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELRRNKYVGFNVQDETQNYKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLK
DIVSLMSEQLTKRLKEQDLSIELTEAAKEKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGHIEKGQHIVLDVEGGE
FVVKTEAKTN
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLSPDKIQKEVESLIGRGQEMSQSIHY
TPRAKKVTELAMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESGGAASGANSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSPEESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEETKKTWKEKQGQENSEVTVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELRRNKYVGFNVQDETQNYKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLK
DIVSLMSEQLTKRLKEQDLSIELTEAAKEKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGHIEKGQHIVLDVEGGE
FVVKTEAKTN
Nucleotide
Download Length: 2433 bp
>NTDB_id=245081 CK945_RS00600 WP_020449838.1 107839..110271(+) (clpC) [Bacillus paralicheniformis strain 14DA11]
ATGATGTTTGGAAGATTCACAGAAAGAGCACAAAAAGTATTGGCGCTTGCTCAAGAAGAAGCTCTGCGTCTGGGCCATAA
TAACATTGGAACAGAACATATTCTCCTCGGCCTTGTCCGCGAGGGAGAAGGGATTGCTGCAAAGGCGCTGCAGGCATTGG
GACTCAGCCCTGACAAGATTCAAAAAGAAGTTGAAAGCCTCATTGGCCGAGGGCAAGAGATGTCACAATCGATCCATTAC
ACACCGAGAGCCAAAAAAGTGACTGAACTGGCGATGGATGAAGCAAGAAAGCTTGGTCACTCCTACGTTGGAACTGAACA
CATCCTCCTCGGCTTAATCCGAGAAGGGGAAGGTGTTGCGGCAAGGGTGCTGAATAATTTAGGCGTCAGCTTAAACAAAG
CGAGACAGCAAGTATTGCAGCTGTTGGGCAGCAATGAGAGCGGTGGCGCTGCTTCAGGCGCCAACAGCAATGCCAACACA
CCAACCTTAGACAGTCTTGCCAGGGATCTCACGGCGATTGCAAAAGAAGACAGCCTTGACCCCGTAATCGGCAGAAGCAA
AGAAATTCAGCGCGTAATTGAAGTGCTGAGCCGCAGAACGAAAAACAACCCTGTGTTAATCGGGGAGCCCGGTGTCGGTA
AGACAGCGATTGCCGAAGGCCTCGCCCAGCAGATCATCAATAACGAAGTACCGGAGATTCTCCGCGATAAGCGAGTTATG
ACGCTTGATATGGGAACGGTTGTCGCCGGTACGAAATACCGCGGTGAATTTGAAGACCGTCTGAAAAAAGTGATGGACGA
AATTCGTCAAGCGGGAAATATCATCCTCTTTATCGATGAGCTGCATACTCTCATCGGAGCCGGGGGAGCGGAAGGGGCCA
TCGATGCCTCCAATATCCTTAAACCGTCTTTGGCGCGCGGAGAGCTGCAATGTATCGGAGCGACAACCCTTGATGAATAC
CGCAAATACATTGAAAAAGATGCTGCACTCGAACGGCGTTTTCAGCCGATTCAGGTTGACCAGCCGTCTCCTGAAGAGAG
CATTCAAATATTGAGAGGTCTCAGAGACCGCTATGAAGCCCACCACCGCGTATCGATTACGGATGAAGCGATTGAAGCGG
CTGTGAAGCTGTCAGACCGGTATATTTCGGACCGTTTTCTGCCTGACAAGGCGATCGACTTAATCGATGAAGCCGGTTCA
AAGGTTCGCCTGCGTTCATTTACAACGCCTCCGAACTTAAAAGAGCTTGAACAAAAGCTTGATGAAGTAAGGAAAGAAAA
AGATGCCGCTGTCCAAAGCCAGGAATTCGAAAAAGCAGCGTCATTACGGGATACGGAGCAGCGCCTGCGCGAACAGGTCG
AAGAAACCAAGAAAACCTGGAAAGAAAAGCAGGGACAGGAAAATTCAGAAGTGACCGTCGACGATATTGCAATGGTTGTT
TCAAGCTGGACCGGAGTGCCGGTTTCGAAAATTGCGCAGACTGAAACAGACAAATTACTGAACATGGAGAGCATTCTTCA
TTCCCGCGTTATCGGCCAAGATGAGGCTGTCGTTGCGGTTGCCAAAGCAGTCAGACGCGCGCGTGCCGGCTTAAAAGATC
CAAAACGTCCTATCGGTTCTTTTATTTTCCTCGGCCCTACAGGCGTAGGAAAAACGGAGCTTGCCCGTGCACTTGCCGAG
TCCATTTTCGGCGATGAAGAAGCCATGATTCGCATCGATATGTCCGAGTATATGGAAAAACATTCAACATCAAGACTCGT
CGGTTCCCCTCCGGGATATGTCGGCTATGATGAAGGCGGACAGCTCACTGAAAAAGTGAGAAGAAAACCGTATTCCGTCG
TCTTGCTTGACGAAATCGAAAAAGCGCACCCTGATGTCTTCAATATTTTGCTGCAAGTGCTTGAAGACGGTCGCCTGACT
GATTCAAAAGGGCGCACGGTCGACTTTAGAAATACGATTTTGATCATGACATCAAACGTCGGTGCGAGCGAACTGAGAAG
AAATAAATACGTCGGGTTTAATGTGCAGGATGAAACCCAGAATTATAAAGATATGAAAGACAAAGTCATGGGCGAATTAA
AACGCGCCTTCAGACCTGAATTTATCAACCGGATTGATGAGATTATCGTCTTCCACTCTTTGGAGAAAAAACATTTGAAA
GATATTGTATCCCTCATGTCAGAACAATTAACTAAGCGTCTGAAAGAACAGGATCTGTCAATTGAGCTGACTGAAGCGGC
TAAAGAAAAAATTGCCGATGAAGGCGTGGATCTCGAATACGGGGCGCGCCCTCTCAGAAGAGCAATCCAAAAACACGTGG
AGGACCGGCTGTCTGAAGAGCTCCTGAAAGGCCATATTGAAAAAGGCCAGCATATTGTTTTGGATGTAGAAGGCGGAGAA
TTTGTCGTAAAAACCGAAGCTAAAACGAACTAA
ATGATGTTTGGAAGATTCACAGAAAGAGCACAAAAAGTATTGGCGCTTGCTCAAGAAGAAGCTCTGCGTCTGGGCCATAA
TAACATTGGAACAGAACATATTCTCCTCGGCCTTGTCCGCGAGGGAGAAGGGATTGCTGCAAAGGCGCTGCAGGCATTGG
GACTCAGCCCTGACAAGATTCAAAAAGAAGTTGAAAGCCTCATTGGCCGAGGGCAAGAGATGTCACAATCGATCCATTAC
ACACCGAGAGCCAAAAAAGTGACTGAACTGGCGATGGATGAAGCAAGAAAGCTTGGTCACTCCTACGTTGGAACTGAACA
CATCCTCCTCGGCTTAATCCGAGAAGGGGAAGGTGTTGCGGCAAGGGTGCTGAATAATTTAGGCGTCAGCTTAAACAAAG
CGAGACAGCAAGTATTGCAGCTGTTGGGCAGCAATGAGAGCGGTGGCGCTGCTTCAGGCGCCAACAGCAATGCCAACACA
CCAACCTTAGACAGTCTTGCCAGGGATCTCACGGCGATTGCAAAAGAAGACAGCCTTGACCCCGTAATCGGCAGAAGCAA
AGAAATTCAGCGCGTAATTGAAGTGCTGAGCCGCAGAACGAAAAACAACCCTGTGTTAATCGGGGAGCCCGGTGTCGGTA
AGACAGCGATTGCCGAAGGCCTCGCCCAGCAGATCATCAATAACGAAGTACCGGAGATTCTCCGCGATAAGCGAGTTATG
ACGCTTGATATGGGAACGGTTGTCGCCGGTACGAAATACCGCGGTGAATTTGAAGACCGTCTGAAAAAAGTGATGGACGA
AATTCGTCAAGCGGGAAATATCATCCTCTTTATCGATGAGCTGCATACTCTCATCGGAGCCGGGGGAGCGGAAGGGGCCA
TCGATGCCTCCAATATCCTTAAACCGTCTTTGGCGCGCGGAGAGCTGCAATGTATCGGAGCGACAACCCTTGATGAATAC
CGCAAATACATTGAAAAAGATGCTGCACTCGAACGGCGTTTTCAGCCGATTCAGGTTGACCAGCCGTCTCCTGAAGAGAG
CATTCAAATATTGAGAGGTCTCAGAGACCGCTATGAAGCCCACCACCGCGTATCGATTACGGATGAAGCGATTGAAGCGG
CTGTGAAGCTGTCAGACCGGTATATTTCGGACCGTTTTCTGCCTGACAAGGCGATCGACTTAATCGATGAAGCCGGTTCA
AAGGTTCGCCTGCGTTCATTTACAACGCCTCCGAACTTAAAAGAGCTTGAACAAAAGCTTGATGAAGTAAGGAAAGAAAA
AGATGCCGCTGTCCAAAGCCAGGAATTCGAAAAAGCAGCGTCATTACGGGATACGGAGCAGCGCCTGCGCGAACAGGTCG
AAGAAACCAAGAAAACCTGGAAAGAAAAGCAGGGACAGGAAAATTCAGAAGTGACCGTCGACGATATTGCAATGGTTGTT
TCAAGCTGGACCGGAGTGCCGGTTTCGAAAATTGCGCAGACTGAAACAGACAAATTACTGAACATGGAGAGCATTCTTCA
TTCCCGCGTTATCGGCCAAGATGAGGCTGTCGTTGCGGTTGCCAAAGCAGTCAGACGCGCGCGTGCCGGCTTAAAAGATC
CAAAACGTCCTATCGGTTCTTTTATTTTCCTCGGCCCTACAGGCGTAGGAAAAACGGAGCTTGCCCGTGCACTTGCCGAG
TCCATTTTCGGCGATGAAGAAGCCATGATTCGCATCGATATGTCCGAGTATATGGAAAAACATTCAACATCAAGACTCGT
CGGTTCCCCTCCGGGATATGTCGGCTATGATGAAGGCGGACAGCTCACTGAAAAAGTGAGAAGAAAACCGTATTCCGTCG
TCTTGCTTGACGAAATCGAAAAAGCGCACCCTGATGTCTTCAATATTTTGCTGCAAGTGCTTGAAGACGGTCGCCTGACT
GATTCAAAAGGGCGCACGGTCGACTTTAGAAATACGATTTTGATCATGACATCAAACGTCGGTGCGAGCGAACTGAGAAG
AAATAAATACGTCGGGTTTAATGTGCAGGATGAAACCCAGAATTATAAAGATATGAAAGACAAAGTCATGGGCGAATTAA
AACGCGCCTTCAGACCTGAATTTATCAACCGGATTGATGAGATTATCGTCTTCCACTCTTTGGAGAAAAAACATTTGAAA
GATATTGTATCCCTCATGTCAGAACAATTAACTAAGCGTCTGAAAGAACAGGATCTGTCAATTGAGCTGACTGAAGCGGC
TAAAGAAAAAATTGCCGATGAAGGCGTGGATCTCGAATACGGGGCGCGCCCTCTCAGAAGAGCAATCCAAAAACACGTGG
AGGACCGGCTGTCTGAAGAGCTCCTGAAAGGCCATATTGAAAAAGGCCAGCATATTGTTTTGGATGTAGAAGGCGGAGAA
TTTGTCGTAAAAACCGAAGCTAAAACGAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
95.926 |
100 |
0.959 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.375 |
98.765 |
0.498 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.973 |
100 |
0.479 |
| clpC | Streptococcus thermophilus LMD-9 |
46.852 |
100 |
0.478 |
| clpC | Streptococcus pneumoniae Rx1 |
45.488 |
99.877 |
0.454 |
| clpC | Streptococcus pneumoniae D39 |
45.488 |
99.877 |
0.454 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.365 |
99.877 |
0.453 |
| clpC | Streptococcus mutans UA159 |
43.728 |
100 |
0.452 |
| clpE | Streptococcus mutans UA159 |
53.313 |
80.123 |
0.427 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
48.324 |
88.395 |
0.427 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.582 |
78.889 |
0.415 |
| clpE | Streptococcus pneumoniae Rx1 |
52.582 |
78.889 |
0.415 |
| clpE | Streptococcus pneumoniae D39 |
52.582 |
78.889 |
0.415 |
| clpE | Streptococcus pneumoniae R6 |
52.582 |
78.889 |
0.415 |