Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   M28_RS09075 Genome accession   NC_007296
Coordinates   1788464..1789177 (+) Length   237 a.a.
NCBI ID   WP_002982243.1    Uniprot ID   A0A9X5LXW4
Organism   Streptococcus pyogenes MGAS6180     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1783464..1794177
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M28_RS09065 (M28_Spy1767) treC 1784533..1786161 (-) 1629 WP_011285257.1 alpha,alpha-phosphotrehalase -
  M28_RS09070 (M28_Spy1768) treP 1786229..1788253 (-) 2025 WP_011285258.1 PTS system trehalose-specific EIIBC component -
  M28_RS09075 (M28_Spy1769) treR 1788464..1789177 (+) 714 WP_002982243.1 trehalose operon repressor Regulator
  M28_RS09085 (M28_Spy1770) - 1789456..1789793 (-) 338 Protein_1695 winged helix-turn-helix transcriptional regulator -
  M28_RS09090 (M28_Spy1771) - 1789980..1790837 (+) 858 WP_011285260.1 VOC family protein -
  M28_RS09095 (M28_Spy1772) yaaA 1790879..1791610 (+) 732 WP_011285261.1 peroxide stress protein YaaA -
  M28_RS09100 (M28_Spy1773) nrdG 1791784..1792398 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  M28_RS09105 (M28_Spy1774) - 1792398..1792907 (-) 510 WP_011285262.1 GNAT family N-acetyltransferase -
  M28_RS09110 (M28_Spy1775) - 1792916..1793851 (-) 936 WP_002992828.1 Gfo/Idh/MocA family protein -
  M28_RS09845 (M28_Spy1776) - 1793880..1794026 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=24508 M28_RS09075 WP_002982243.1 1788464..1789177(+) (treR) [Streptococcus pyogenes MGAS6180]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=24508 M28_RS09075 WP_002982243.1 1788464..1789177(+) (treR) [Streptococcus pyogenes MGAS6180]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679

Multiple sequence alignment