Detailed information
Bioinformatically predicted
Overview
| Name | sxy/tfoX | Type | Regulator |
| Locus tag | C9E34_RS18980 | Genome accession | NZ_CP028700 |
| Coordinates | 3568325..3568954 (-) | Length | 209 a.a. |
| NCBI ID | WP_000839159.1 | Uniprot ID | Q8XD96 |
| Organism | Escherichia coli strain 105 | ||
| Function | positive regulator of competence gene (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3563325..3573954
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E34_RS18965 (C9E34_19730) | helD | 3563567..3565621 (-) | 2055 | WP_001301436.1 | DNA helicase IV | - |
| C9E34_RS18970 (C9E34_19735) | yccF | 3565744..3566190 (+) | 447 | WP_001261230.1 | YccF domain-containing protein | - |
| C9E34_RS18975 (C9E34_19740) | yccS | 3566200..3568362 (+) | 2163 | WP_000875023.1 | YccS family putative transporter | - |
| C9E34_RS18980 (C9E34_19745) | sxy/tfoX | 3568325..3568954 (-) | 630 | WP_000839159.1 | CRP-S regulon transcriptional coactivator Sxy | Regulator |
| C9E34_RS18985 (C9E34_19750) | sulA | 3569173..3569682 (+) | 510 | WP_000288710.1 | SOS-induced cell division inhibitor SulA | - |
| C9E34_RS18990 (C9E34_19760) | ompA | 3570039..3571079 (+) | 1041 | WP_000750416.1 | porin OmpA | - |
| C9E34_RS18995 (C9E34_19765) | matP | 3571155..3571607 (-) | 453 | WP_000877161.1 | macrodomain Ter protein MatP | - |
| C9E34_RS19000 (C9E34_19770) | ycbZ | 3571793..3573553 (+) | 1761 | WP_000156526.1 | Lon protease family protein | - |
Sequence
Protein
Download Length: 209 a.a. Molecular weight: 24173.05 Da Isoelectric Point: 9.1942
>NTDB_id=245032 C9E34_RS18980 WP_000839159.1 3568325..3568954(-) (sxy/tfoX) [Escherichia coli strain 105]
MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKYPPVWLTYKKCGRSVTLN
YYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQN
SLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE
MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKYPPVWLTYKKCGRSVTLN
YYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQN
SLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE
Nucleotide
Download Length: 630 bp
>NTDB_id=245032 C9E34_RS18980 WP_000839159.1 3568325..3568954(-) (sxy/tfoX) [Escherichia coli strain 105]
ATGAAAAGCCTCTCCTATAAGCGGATCTATAAATCACAAGAATACCTGGCAACGTTGGGCACAATTGAATACCGATCATT
GTTTGGCAGTTACAGCCTGACCGTTGACGACACGGTGTTTGCGATGGTTTCTGATGGTGAGTTGTATCTTCGGGCTTGTG
AGCAAAGTGCACAGTACTGTGTAAAATATCCGCCTGTCTGGCTGACATATAAAAAGTGTGGCCGATCCGTTACCCTCAAT
TACTATCGGGTTGATGAAAGTCTATGGCGAAATCAACTGAAGCTGGTGCGTCTGTCGAAATATTCTCTCGATGCAGCGCT
GAAAGAGAAAAGCACGCGCAATACCCGGGAAAGACTGAAAGATTTGCCCAATATGTCTTTTCATCTGGAAGCGATTCTCG
GGGAGGTGGGGATTAAGGATGTACGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAAC
AGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACG
CCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAA
ATGAAAAGCCTCTCCTATAAGCGGATCTATAAATCACAAGAATACCTGGCAACGTTGGGCACAATTGAATACCGATCATT
GTTTGGCAGTTACAGCCTGACCGTTGACGACACGGTGTTTGCGATGGTTTCTGATGGTGAGTTGTATCTTCGGGCTTGTG
AGCAAAGTGCACAGTACTGTGTAAAATATCCGCCTGTCTGGCTGACATATAAAAAGTGTGGCCGATCCGTTACCCTCAAT
TACTATCGGGTTGATGAAAGTCTATGGCGAAATCAACTGAAGCTGGTGCGTCTGTCGAAATATTCTCTCGATGCAGCGCT
GAAAGAGAAAAGCACGCGCAATACCCGGGAAAGACTGAAAGATTTGCCCAATATGTCTTTTCATCTGGAAGCGATTCTCG
GGGAGGTGGGGATTAAGGATGTACGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAAC
AGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACG
CCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sxy/tfoX | Escherichia coli BW25113 strain K-12 |
99.522 |
100 |
0.995 |