Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   CIW71_RS06670 Genome accession   NZ_CP023155
Coordinates   1498515..1498916 (+) Length   133 a.a.
NCBI ID   WP_005913706.1    Uniprot ID   A0AAI7ZH35
Organism   Xanthomonas citri pv. malvacearum strain AR81009     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1493515..1503916
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CIW71_RS06650 (CIW71_06650) tsaB 1494749..1495468 (+) 720 WP_003482499.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  CIW71_RS06655 (CIW71_06655) - 1495465..1496382 (+) 918 WP_005913699.1 ADP-ribosylglycohydrolase family protein -
  CIW71_RS06660 (CIW71_06660) - 1496456..1497331 (-) 876 WP_005913700.1 TonB family protein -
  CIW71_RS06665 (CIW71_06665) gshB 1497328..1498278 (-) 951 WP_033836727.1 glutathione synthase -
  CIW71_RS06670 (CIW71_06670) pilG 1498515..1498916 (+) 402 WP_005913706.1 twitching motility response regulator PilG Regulator
  CIW71_RS06675 (CIW71_06675) - 1498934..1499296 (+) 363 WP_005913708.1 response regulator -
  CIW71_RS06680 (CIW71_06680) - 1499296..1499826 (+) 531 WP_003482487.1 chemotaxis protein CheW -
  CIW71_RS06685 (CIW71_06685) - 1499866..1501902 (+) 2037 WP_033836726.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14667.03 Da        Isoelectric Point: 6.9539

>NTDB_id=245008 CIW71_RS06670 WP_005913706.1 1498515..1498916(+) (pilG) [Xanthomonas citri pv. malvacearum strain AR81009]
MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=245008 CIW71_RS06670 WP_005913706.1 1498515..1498916(+) (pilG) [Xanthomonas citri pv. malvacearum strain AR81009]
ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTCATCGATGACTCGAAAACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGTTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAATCGACGCCGGTGATCATGTTGTCGTCCAAGGACGGCCTGTTCGACAAGGCACGCGGCCGCAT
CGTCGGTTCCGAGCAATATCTGACCAAGCCGTTCACCCGTGAAGAACTACTGAGCGCGATCCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment