Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   CK238_RS07525 Genome accession   NZ_CP023075
Coordinates   1428297..1428893 (+) Length   198 a.a.
NCBI ID   WP_003154591.1    Uniprot ID   -
Organism   Bacillus velezensis strain K26     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1423297..1433893
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CK238_RS07495 (CK238_07500) - 1423511..1423966 (+) 456 WP_014417614.1 flavodoxin -
  CK238_RS07500 (CK238_07505) dapD 1424048..1424758 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  CK238_RS07505 (CK238_07510) - 1424829..1425953 (+) 1125 WP_063636606.1 N-acetyldiaminopimelate deacetylase -
  CK238_RS07510 (CK238_07515) - 1426014..1426259 (+) 246 WP_003154596.1 YkuS family protein -
  CK238_RS07515 (CK238_07520) - 1426293..1427099 (-) 807 WP_025649509.1 mechanosensitive ion channel family protein -
  CK238_RS07520 (CK238_07525) - 1427387..1427845 (+) 459 WP_025649508.1 TlpA disulfide reductase family protein -
  CK238_RS07525 (CK238_07530) rok 1428297..1428893 (+) 597 WP_003154591.1 transcriptional regulator Rok Regulator
  CK238_RS07530 (CK238_07535) - 1428914..1429906 (-) 993 WP_014417619.1 hypothetical protein -
  CK238_RS07535 (CK238_07540) - 1430052..1430654 (+) 603 WP_063636607.1 molybdenum cofactor guanylyltransferase -
  CK238_RS07540 (CK238_07545) - 1430706..1431725 (+) 1020 WP_063636608.1 molybdopterin-synthase adenylyltransferase MoeB -
  CK238_RS07545 (CK238_07550) glp 1431743..1433035 (+) 1293 WP_063636609.1 gephyrin-like molybdotransferase Glp -
  CK238_RS07550 (CK238_07555) mobB 1432996..1433517 (+) 522 WP_063636610.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22525.57 Da        Isoelectric Point: 9.6909

>NTDB_id=244763 CK238_RS07525 WP_003154591.1 1428297..1428893(+) (rok) [Bacillus velezensis strain K26]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=244763 CK238_RS07525 WP_003154591.1 1428297..1428893(+) (rok) [Bacillus velezensis strain K26]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACAGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCTCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCGGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACGTTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843

Multiple sequence alignment