Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   CK238_RS05935 Genome accession   NZ_CP023075
Coordinates   1128220..1129173 (+) Length   317 a.a.
NCBI ID   WP_014417407.1    Uniprot ID   A0AAP4DIE0
Organism   Bacillus velezensis strain K26     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1123220..1134173
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CK238_RS05905 (CK238_05895) argF 1125038..1126009 (+) 972 WP_017417442.1 ornithine carbamoyltransferase -
  CK238_RS05910 (CK238_05900) - 1126084..1126263 (+) 180 WP_003155070.1 YjzC family protein -
  CK238_RS05915 (CK238_05905) - 1126300..1126485 (-) 186 WP_007409129.1 YjzD family protein -
  CK238_RS05925 (CK238_05915) - 1126746..1127480 (+) 735 WP_014417405.1 hypothetical protein -
  CK238_RS05930 (CK238_05920) - 1127563..1128129 (+) 567 WP_025649580.1 hypothetical protein -
  CK238_RS05935 (CK238_05925) med 1128220..1129173 (+) 954 WP_014417407.1 BMP family ABC transporter substrate-binding protein Regulator
  CK238_RS05940 (CK238_05930) comZ 1129186..1129377 (+) 192 WP_003155061.1 ComZ family protein Regulator
  CK238_RS05945 (CK238_05935) - 1129406..1129624 (-) 219 WP_007409123.1 hypothetical protein -
  CK238_RS05950 (CK238_05940) - 1129792..1130730 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  CK238_RS05955 (CK238_05945) fabF 1130753..1131991 (+) 1239 WP_025649581.1 beta-ketoacyl-ACP synthase II -
  CK238_RS05960 (CK238_05950) - 1132075..1132860 (+) 786 WP_017417447.1 DUF2268 domain-containing protein -
  CK238_RS05965 (CK238_05955) - 1133034..1134020 (+) 987 WP_017417448.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35343.93 Da        Isoelectric Point: 4.6686

>NTDB_id=244754 CK238_RS05935 WP_014417407.1 1128220..1129173(+) (med) [Bacillus velezensis strain K26]
MITRLVMTFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKNNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=244754 CK238_RS05935 WP_014417407.1 1128220..1129173(+) (med) [Bacillus velezensis strain K26]
TTGATCACCAGGCTTGTCATGACCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGGACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATTTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGCTTTTTCGGGGGAATGACGGCCGCCCATATGTCAAAAAACAATGAGGTCGGCGTCATCGCCTCTTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGAGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTCAAAACGTATAACAGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

77.918

100

0.779

Multiple sequence alignment