Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   TTH_RS09995 Genome accession   NC_006461
Coordinates   1844044..1844853 (-) Length   269 a.a.
NCBI ID   WP_011229053.1    Uniprot ID   Q5SGW1
Organism   Thermus thermophilus HB8     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1839044..1849853
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  TTH_RS09965 (TTHA1963) rsmI 1839205..1839999 (-) 795 WP_011229050.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  TTH_RS09970 (TTHA1964) - 1840001..1840495 (-) 495 WP_011229051.1 hypothetical protein -
  TTH_RS09975 (TTHA1965) - 1840559..1841086 (-) 528 WP_011173971.1 inorganic diphosphatase -
  TTH_RS09980 (TTHA1966) - 1841119..1841745 (+) 627 WP_011173972.1 YcxB family protein -
  TTH_RS09985 (TTHA1967) comEA 1841718..1842026 (+) 309 WP_024119555.1 helix-hairpin-helix domain-containing protein Machinery gene
  TTH_RS09990 (TTHA1968) comA/comEC 1842023..1844056 (+) 2034 WP_011229052.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  TTH_RS09995 (TTHA1969) spo0J 1844044..1844853 (-) 810 WP_011229053.1 ParB/RepB/Spo0J family partition protein Regulator
  TTH_RS10000 (TTHA1970) soj 1844837..1845586 (-) 750 WP_011229054.1 chromosome-partitioning ATPase Soj -
  TTH_RS10005 (TTHA1971) rsmG 1845580..1846329 (-) 750 WP_011229055.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -
  TTH_RS10010 (TTHA1972) mnmG 1846329..1848122 (-) 1794 WP_011229056.1 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG -
  TTH_RS10015 (TTHA1973) dnaA 1848185..1849495 (+) 1311 WP_011229057.1 chromosomal replication initiator protein DnaA -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29760.65 Da        Isoelectric Point: 10.1293

>NTDB_id=24468 TTH_RS09995 WP_011229053.1 1844044..1844853(-) (spo0J) [Thermus thermophilus HB8]
MSRKPSGLGRGLEALLPKTGAGVVRLPLASIRPNPRQPRKRFAEESLKELADSIREKGLLQPLLVRPQGDGYELVAGERR
YRAALMAGLQEVPAVVKDLTDREALELALVENLQREDLSPVEEARGYQALLEMGLTQEEVARRVGKARSTVANALRLLQL
PPEALEALERGEITAGHARALLMLEPEDRLWGLKEILEKGLSVRQAEALRERLAMAPKRPAEPSPLSLELSRHLGLPVRV
VGGKKGKVVIQYRSLEELEALLRRLGYQA

Nucleotide


Download         Length: 810 bp        

>NTDB_id=24468 TTH_RS09995 WP_011229053.1 1844044..1844853(-) (spo0J) [Thermus thermophilus HB8]
GTGTCCAGGAAGCCTAGCGGTCTCGGGCGGGGCCTCGAGGCCCTGCTCCCCAAGACGGGGGCGGGGGTGGTCCGCCTGCC
CCTCGCCAGCATCCGCCCCAACCCCCGCCAGCCGCGGAAGCGGTTCGCCGAGGAGAGCCTCAAGGAGCTCGCCGACTCCA
TCCGGGAGAAGGGCCTCCTCCAACCCCTCCTCGTCCGGCCCCAGGGGGACGGGTACGAGCTCGTGGCGGGGGAAAGGCGC
TACCGGGCCGCCCTCATGGCGGGGCTTCAGGAGGTCCCCGCCGTGGTCAAGGACCTCACGGACCGGGAGGCCTTGGAGCT
CGCCCTGGTGGAGAACCTCCAGCGGGAGGACCTCTCCCCTGTGGAGGAGGCCCGGGGCTACCAGGCCCTTTTGGAGATGG
GCCTCACCCAGGAGGAGGTGGCCCGGCGGGTGGGCAAGGCCCGCTCCACCGTGGCCAACGCCCTCAGGCTCCTCCAGCTT
CCCCCCGAGGCCCTCGAGGCCCTGGAGCGGGGGGAGATCACCGCGGGCCACGCCCGGGCCCTCCTCATGCTGGAGCCCGA
GGACCGGCTCTGGGGGCTTAAGGAGATCCTGGAGAAGGGGCTTTCCGTGCGGCAGGCGGAGGCCCTGAGGGAGCGCCTGG
CCATGGCCCCTAAGCGCCCCGCTGAGCCCTCCCCCCTCTCCCTGGAGCTCTCCCGCCACCTGGGCCTGCCCGTGAGGGTG
GTGGGGGGGAAGAAGGGCAAGGTGGTGATCCAGTACCGCTCCTTGGAGGAGCTGGAGGCCCTTCTGCGGCGCCTCGGCTA
CCAGGCGTAG

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(162-210)

ParB/Sulfiredoxin domain (ParB_N)

(26-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5SGW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.6

92.937

0.387

Multiple sequence alignment