Detailed information NTG0244622

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: CK207_RS13880
• Genome accession: NZ_CP023054
• Coordinates: 2958019..2959026 (-)
• Length: 335 a.a.
• NCBI ID: WP_017043195.1
• Uniprot ID: A0AAW8GSK0
• Organism: Vibrio anguillarum strain VIB43
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2953019..2964026

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CK207_RS13855 (CK207_13855)	rraA	2953682..2954203 (-)	522	WP_026027418.1	ribonuclease E activity regulator RraA	-
CK207_RS13860 (CK207_13860)	-	2954280..2955197 (-)	918	WP_019282911.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
CK207_RS13865 (CK207_13865)	hslU	2955320..2956651 (-)	1332	WP_013855851.1	HslU--HslV peptidase ATPase subunit	-
CK207_RS13870 (CK207_13870)	hslV	2956687..2957253 (-)	567	WP_017046778.1	ATP-dependent protease subunit HslV	-
CK207_RS13875 (CK207_13875)	-	2957374..2957916 (-)	543	WP_013855850.1	SPOR domain-containing protein	-
CK207_RS13880 (CK207_13880)	cytR	2958019..2959026 (-)	1008	WP_017043195.1	DNA-binding transcriptional regulator CytR	Regulator
CK207_RS13885 (CK207_13885)	priA	2959332..2961533 (-)	2202	WP_019282912.1	primosomal protein N'	-
CK207_RS13890 (CK207_13890)	rpmE	2961802..2962017 (+)	216	WP_010318344.1	50S ribosomal protein L31	-
CK207_RS13895 (CK207_13895)	-	2962223..2963500 (+)	1278	WP_026027888.1	malic enzyme-like NAD(P)-binding protein	-
CK207_RS13900 (CK207_13900)	metJ	2963649..2963975 (-)	327	WP_010318342.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36770.41 Da
• Isoelectric Point: 6.6397

>NTDB_id=244622 CK207_RS13880 WP_017043195.1 2958019..2959026(-) (cytR) [Vibrio anguillarum strain VIB43]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYFTEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSLVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPAEATLCKFRHQGYQQALRRAGITMNPNYCTYGDFTFEAGAKALRQLLALSEPPTA
IFSHNDSMAIGVIKEAKKLGLRVPQDISVVGFDDIQFALYCDPPLTTISQPRYEIGRQAMLMMLDLLRGQEVGAGSRLLE
TKLVIRESAAPPRLS

Nucleotide

• Length: 1008 bp

>NTDB_id=244622 CK207_RS13880 WP_017043195.1 2958019..2959026(-) (cytR) [Vibrio anguillarum strain VIB43]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGTGTATCAACCGCCACGGTATCTAGGGCGTTGATGAACCCTGAAAA
AGTATCATCTTCAACGCGAAAGCGTGTCGAAGATGCTGTTTTGGAAGCTGGTTACTCACCAAATTCTCTCGCTCGCAACT
TACGCCGTAATGAATCTAAAACCATTGTCGCTATCGTGCCTGATATTTGTGACCCTTACTTCACAGAGATCATTCGTGGT
ATCGAAGATGCGGCGATGGAACATGGTTATTTAGTACTGTTGGGTGATAGTGGTCAGCAGAAAAAGCGAGAAAGTTCGTT
AGTTAACCTCGTATTTACTAAGCAGGCCGATGGCATGTTGTTGCTGGGAACGGATTTGCCGTTTGATGTTAGTAAGCCGG
AGCAAAAAAACCTGCCACCTATGGTCATGGCATGTGAATTTGCGCCAGAACTTGAGTTGCCGACGGTACATATTGATAAC
CTTACTTCAGCGTTTGAAGCGGTGAACTATTTGACGCAGCTCGGGCACAAACGCATCGCGCAAATATCGGGGCCAGCAGA
GGCCACGCTGTGTAAGTTCCGCCATCAAGGTTATCAACAAGCTTTACGCCGCGCAGGAATTACCATGAACCCTAATTATT
GCACTTATGGTGATTTTACTTTTGAAGCTGGGGCTAAAGCACTGCGCCAATTATTGGCGTTATCTGAGCCACCCACAGCC
ATTTTTAGTCATAATGACAGTATGGCGATCGGTGTCATTAAGGAAGCCAAAAAATTGGGCTTGCGCGTTCCACAAGATAT
TTCAGTGGTGGGATTTGATGATATTCAATTTGCGCTCTACTGCGATCCACCGTTAACGACCATCTCACAGCCGCGCTATG
AGATAGGGCGTCAAGCGATGCTCATGATGCTCGATCTTCTTCGCGGTCAAGAGGTTGGCGCAGGTTCTCGACTATTAGAA
ACCAAGTTAGTGATTCGAGAAAGCGCAGCGCCTCCTCGCTTGAGCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	92.169	99.104	0.913
cytR	Vibrio parahaemolyticus RIMD 2210633	87.387	99.403	0.869