Detailed information NTG0244494

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: CJF12_RS13570
• Genome accession: NZ_CP023049
• Coordinates: 3123319..3124428 (+)
• Length: 369 a.a.
• NCBI ID: WP_034680838.1
• Uniprot ID: A0A086BNC4
• Organism: Chryseobacterium piperi strain ATCC BAA-1782
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 3118319..3129428

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CJF12_RS13550 (CJF12_13665)	sufC	3119084..3119827 (+)	744	WP_034680832.1	Fe-S cluster assembly ATPase SufC	-
CJF12_RS13555 (CJF12_13670)	sufD	3119941..3121248 (+)	1308	WP_034680935.1	Fe-S cluster assembly protein SufD	-
CJF12_RS13560 (CJF12_13675)	-	3121320..3122246 (-)	927	WP_034680835.1	DUF3078 domain-containing protein	-
CJF12_RS13565 (CJF12_13680)	-	3122518..3123285 (+)	768	WP_034680837.1	rhomboid family intramembrane serine protease	-
CJF12_RS13570 (CJF12_13685)	dprA	3123319..3124428 (+)	1110	WP_034680838.1	DNA-processing protein DprA	Machinery gene
CJF12_RS13575 (CJF12_13690)	gdhA	3124619..3125977 (+)	1359	WP_034680840.1	NADP-specific glutamate dehydrogenase	-
CJF12_RS13580 (CJF12_13695)	-	3126161..3126469 (-)	309	WP_034680842.1	hypothetical protein	-
CJF12_RS13585 (CJF12_13700)	-	3126588..3127076 (-)	489	WP_034680843.1	YkgJ family cysteine cluster protein	-
CJF12_RS13590 (CJF12_13705)	-	3127225..3127983 (-)	759	WP_034681491.1	IS5 family transposase	-
CJF12_RS13595 (CJF12_13710)	-	3128331..3129323 (-)	993	WP_034687918.1	hypothetical protein	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 41466.61 Da
• Isoelectric Point: 7.4790

>NTDB_id=244494 CJF12_RS13570 WP_034680838.1 3123319..3124428(+) (dprA) [Chryseobacterium piperi strain ATCC BAA-1782]
MISEEHLYAIALRECSLIGDINFTKLIKAFGSAKNVWENAKKEFRKMDGFGRKMVSDIGNPIHLNFAEKEIAFCESNHIR
IRLKHHDELPFLLNECEDAPAILYQKGNLKNPSLPISIVGTRNMTSYGRQFIKDFFEETKVYNFISVSGLALGVDREVHD
QSIQNEIPTAAILAHGFQTLYPSKNKKLSEKIIEEGGALFTEFNSSRKPDRENFIQRNRIIAGISPVTIVVETAFGGGSI
STASFANNYNREVFALPGKITDPYSQGCNHLIFQNKASTISSIKTLILSLGFNQPKEKMEELFPPSPSTVQLSENQNIIY
KYISENPQINLDELAEKISLSTHKILPIILELELLGKLKTLSGRQFIAI

Nucleotide

• Length: 1110 bp

>NTDB_id=244494 CJF12_RS13570 WP_034680838.1 3123319..3124428(+) (dprA) [Chryseobacterium piperi strain ATCC BAA-1782]
ATGATTTCCGAAGAACATCTTTATGCAATCGCCCTGCGCGAATGCAGCTTAATCGGTGACATCAATTTTACAAAACTCAT
CAAAGCATTTGGAAGTGCAAAAAATGTCTGGGAAAATGCAAAGAAAGAATTCCGTAAGATGGATGGCTTTGGCCGAAAAA
TGGTTTCCGATATCGGAAATCCTATTCACCTCAATTTTGCGGAAAAAGAAATAGCTTTTTGTGAAAGCAATCATATTAGG
ATCAGACTAAAACATCATGATGAATTGCCCTTTCTCCTCAATGAATGTGAAGATGCTCCCGCAATTTTATATCAAAAAGG
AAACTTAAAAAATCCCTCACTTCCTATTAGCATTGTTGGTACAAGAAATATGACCAGTTATGGCAGGCAGTTTATAAAAG
ATTTTTTTGAAGAAACCAAGGTATACAATTTCATATCGGTGAGTGGATTAGCTCTTGGAGTCGACAGAGAAGTTCATGAC
CAATCCATTCAAAATGAAATTCCTACAGCAGCCATTTTGGCTCACGGCTTCCAGACCTTATATCCTTCAAAAAACAAAAA
ATTATCAGAAAAAATCATAGAGGAAGGAGGTGCTTTATTCACTGAGTTCAATTCGTCCAGAAAACCTGACAGAGAAAACT
TTATCCAAAGAAACAGGATCATTGCCGGAATATCACCTGTTACCATTGTAGTAGAAACAGCTTTTGGAGGGGGCTCTATA
AGTACTGCAAGTTTTGCCAACAATTATAACAGAGAGGTATTTGCACTTCCTGGAAAAATTACAGACCCTTATAGCCAAGG
ATGCAATCATCTGATTTTTCAGAATAAAGCATCAACAATTTCATCGATTAAAACACTTATTTTATCACTTGGTTTTAATC
AACCGAAGGAAAAAATGGAAGAACTATTTCCTCCCTCGCCATCTACAGTCCAATTATCTGAAAATCAAAATATAATATAT
AAATACATCTCCGAAAATCCACAAATCAATTTAGATGAATTAGCAGAGAAAATATCGCTCTCTACCCATAAAATTTTGCC
CATAATTTTAGAATTAGAGCTTTTGGGCAAACTAAAAACACTTTCTGGGAGGCAATTTATAGCAATTTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (74-279)

• DprA winged helix domain (DprA_WH) (304-363)

3D structure

• AlphaFold DB: A0A086BNC4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	53.297	98.645	0.526