Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | TTH_RS06195 | Genome accession | NC_006461 |
| Coordinates | 1161319..1161687 (+) | Length | 122 a.a. |
| NCBI ID | WP_011228527.1 | Uniprot ID | Q5SIZ3 |
| Organism | Thermus thermophilus HB8 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1156319..1166687
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TTH_RS06165 (TTHA1215) | - | 1156338..1157318 (-) | 981 | WP_011228521.1 | YpdA family putative bacillithiol disulfide reductase | - |
| TTH_RS06170 (TTHA1216) | pilA/pilA1 | 1157476..1157946 (+) | 471 | WP_011228522.1 | GspH/FimT family protein | Machinery gene |
| TTH_RS06175 (TTHA1217) | - | 1158001..1158468 (+) | 468 | WP_011228523.1 | GspH/FimT family protein | - |
| TTH_RS06180 (TTHA1218) | - | 1158494..1158826 (+) | 333 | WP_224065211.1 | prepilin | - |
| TTH_RS06185 (TTHA1219) | - | 1158823..1159533 (+) | 711 | WP_011228525.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| TTH_RS06190 (TTHA1220) | - | 1159547..1161046 (+) | 1500 | WP_011228526.1 | PilX N-terminal domain-containing pilus assembly protein | - |
| TTH_RS06195 (TTHA1221) | pilV | 1161319..1161687 (+) | 369 | WP_011228527.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| TTH_RS06200 (TTHA1222) | - | 1161746..1162117 (+) | 372 | WP_011228528.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| TTH_RS06210 (TTHA1223) | - | 1162310..1163071 (+) | 762 | WP_011228529.1 | DUF1640 domain-containing protein | - |
| TTH_RS06215 (TTHA1224) | - | 1163147..1163684 (+) | 538 | Protein_1209 | Uma2 family endonuclease | - |
| TTH_RS06220 (TTHA1225) | - | 1163681..1164238 (-) | 558 | WP_011228531.1 | Uma2 family endonuclease | - |
| TTH_RS06225 (TTHA1226) | - | 1164257..1164913 (-) | 657 | WP_011228532.1 | chromosome segregation protein ScpA | - |
| TTH_RS06230 (TTHA1227) | trpS | 1164910..1165923 (-) | 1014 | WP_011173293.1 | tryptophan--tRNA ligase | - |
Sequence
Protein
Download Length: 122 a.a. Molecular weight: 12854.57 Da Isoelectric Point: 6.1490
>NTDB_id=24440 TTH_RS06195 WP_011228527.1 1161319..1161687(+) (pilV) [Thermus thermophilus HB8]
MRNAKGFTLIELLIVIAIIAILAAVLIPNLLNARRNANTTAAQAYVRNVATAVEAERDPTTGALPQLPQACDQFVANPPA
SVTQCNVTANNDGVNFTVTAQLTGARYGSVSFDSSTGQFSFQ
MRNAKGFTLIELLIVIAIIAILAAVLIPNLLNARRNANTTAAQAYVRNVATAVEAERDPTTGALPQLPQACDQFVANPPA
SVTQCNVTANNDGVNFTVTAQLTGARYGSVSFDSSTGQFSFQ
Nucleotide
Download Length: 369 bp
>NTDB_id=24440 TTH_RS06195 WP_011228527.1 1161319..1161687(+) (pilV) [Thermus thermophilus HB8]
ATGCGGAACGCGAAAGGCTTCACCCTGATTGAGCTCCTGATCGTCATCGCCATCATCGCCATCCTGGCTGCGGTTCTCAT
TCCGAACCTTCTCAACGCTCGGAGGAACGCCAACACCACGGCCGCCCAGGCCTACGTGCGCAACGTGGCTACGGCGGTGG
AGGCCGAAAGGGATCCCACCACTGGAGCGTTGCCCCAGCTTCCTCAGGCCTGTGACCAATTCGTCGCAAACCCCCCTGCC
TCGGTCACGCAATGCAACGTTACAGCTAACAACGACGGCGTCAACTTCACGGTTACCGCCCAATTGACCGGGGCCCGGTA
CGGTTCTGTCTCGTTTGACAGCTCCACCGGGCAGTTTAGCTTCCAGTAA
ATGCGGAACGCGAAAGGCTTCACCCTGATTGAGCTCCTGATCGTCATCGCCATCATCGCCATCCTGGCTGCGGTTCTCAT
TCCGAACCTTCTCAACGCTCGGAGGAACGCCAACACCACGGCCGCCCAGGCCTACGTGCGCAACGTGGCTACGGCGGTGG
AGGCCGAAAGGGATCCCACCACTGGAGCGTTGCCCCAGCTTCCTCAGGCCTGTGACCAATTCGTCGCAAACCCCCCTGCC
TCGGTCACGCAATGCAACGTTACAGCTAACAACGACGGCGTCAACTTCACGGTTACCGCCCAATTGACCGGGGCCCGGTA
CGGTTCTGTCTCGTTTGACAGCTCCACCGGGCAGTTTAGCTTCCAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
51.818 |
90.164 |
0.467 |