Detailed information NTG0244332

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: Aba7847_RS13405
• Genome accession: NZ_CP023031
• Coordinates: 2810238..2810939 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 7847
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2805238..2815939

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Aba7847_RS13375 (Aba7847_13335)	-	2805544..2805987 (-)	444	WP_001246675.1	SRPBCC family protein	-
Aba7847_RS13380 (Aba7847_13340)	tadA	2806057..2806560 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
Aba7847_RS13385 (Aba7847_13345)	-	2806567..2807691 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
Aba7847_RS13390 (Aba7847_13350)	ung	2807688..2808401 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
Aba7847_RS13395 (Aba7847_13355)	-	2808452..2809048 (-)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
Aba7847_RS13400 (Aba7847_13360)	gspK	2809279..2810238 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
Aba7847_RS13405 (Aba7847_13365)	xcpW	2810238..2810939 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
Aba7847_RS13410 (Aba7847_13370)	xcpV	2810939..2811319 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
Aba7847_RS13415 (Aba7847_13375)	-	2811309..2811863 (-)	555	WP_000841373.1	type II secretion system protein	-
Aba7847_RS13420 (Aba7847_13380)	-	2811873..2812481 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
Aba7847_RS13425 (Aba7847_13385)	-	2812519..2813292 (-)	774	WP_000497298.1	TatD family hydrolase	-
Aba7847_RS13430 (Aba7847_13390)	-	2813310..2813651 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
Aba7847_RS13435 (Aba7847_13395)	-	2813663..2814643 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
Aba7847_RS13440 (Aba7847_13400)	kdsB	2814655..2815416 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=244332 Aba7847_RS13405 WP_000594589.1 2810238..2810939(-) (xcpW) [Acinetobacter baumannii strain 7847]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=244332 Aba7847_RS13405 WP_000594589.1 2810238..2810939(-) (xcpW) [Acinetobacter baumannii strain 7847]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996