Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | Aba7847_RS04690 | Genome accession | NZ_CP023031 |
| Coordinates | 982693..983166 (+) | Length | 157 a.a. |
| NCBI ID | WP_001214061.1 | Uniprot ID | A0A219CC01 |
| Organism | Acinetobacter baumannii strain 7847 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 977693..988166
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Aba7847_RS04665 (Aba7847_04670) | - | 978157..980262 (-) | 2106 | WP_001117590.1 | RelA/SpoT family protein | - |
| Aba7847_RS04670 | - | 980302..980431 (-) | 130 | Protein_891 | hypothetical protein | - |
| Aba7847_RS04675 (Aba7847_04675) | rpoZ | 980470..980748 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| Aba7847_RS04680 (Aba7847_04680) | gmk | 980821..981450 (-) | 630 | WP_000015937.1 | guanylate kinase | - |
| Aba7847_RS04685 (Aba7847_04685) | ispH | 981573..982523 (+) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| Aba7847_RS04690 (Aba7847_04690) | fimU | 982693..983166 (+) | 474 | WP_001214061.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| Aba7847_RS04695 (Aba7847_04695) | pilV | 983160..983720 (+) | 561 | WP_085916952.1 | type IV pilus modification protein PilV | Machinery gene |
| Aba7847_RS04700 (Aba7847_04700) | pilW | 983721..984722 (+) | 1002 | WP_000079200.1 | PilW family protein | Machinery gene |
| Aba7847_RS04705 (Aba7847_04705) | pilX | 984719..985537 (+) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16836.40 Da Isoelectric Point: 8.5355
>NTDB_id=244317 Aba7847_RS04690 WP_001214061.1 982693..983166(+) (fimU) [Acinetobacter baumannii strain 7847]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILSKLGTLVFKAEENC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILSKLGTLVFKAEENC
Nucleotide
Download Length: 474 bp
>NTDB_id=244317 Aba7847_RS04690 WP_001214061.1 982693..983166(+) (fimU) [Acinetobacter baumannii strain 7847]
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACTACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGTCCAAGCTTGGCACTTTGGTTTTTAAGGCCGAGGAGAATTGTTAA
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACTACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGTCCAAGCTTGGCACTTTGGTTTTTAAGGCCGAGGAGAATTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
98.726 |
100 |
0.987 |