Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | Aba9102_RS12410 | Genome accession | NZ_CP023029 |
| Coordinates | 2536318..2536791 (+) | Length | 157 a.a. |
| NCBI ID | WP_001214060.1 | Uniprot ID | A0A0J0ZM89 |
| Organism | Acinetobacter baumannii strain 9102 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2531318..2541791
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Aba9102_RS12385 (Aba9102_12365) | - | 2531781..2533886 (-) | 2106 | WP_001117590.1 | RelA/SpoT family protein | - |
| Aba9102_RS12390 | - | 2533926..2534056 (-) | 131 | Protein_2395 | hypothetical protein | - |
| Aba9102_RS12395 (Aba9102_12370) | rpoZ | 2534095..2534373 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| Aba9102_RS12400 (Aba9102_12375) | gmk | 2534446..2535075 (-) | 630 | WP_000015937.1 | guanylate kinase | - |
| Aba9102_RS12405 (Aba9102_12380) | ispH | 2535198..2536148 (+) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| Aba9102_RS12410 (Aba9102_12385) | fimU | 2536318..2536791 (+) | 474 | WP_001214060.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| Aba9102_RS12415 (Aba9102_12390) | pilV | 2536785..2537345 (+) | 561 | WP_002194578.1 | type IV pilus modification protein PilV | Machinery gene |
| Aba9102_RS12420 (Aba9102_12395) | pilW | 2537346..2538347 (+) | 1002 | WP_000079197.1 | PilW family protein | Machinery gene |
| Aba9102_RS12425 (Aba9102_12400) | pilX | 2538344..2539162 (+) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16883.50 Da Isoelectric Point: 8.5355
>NTDB_id=244278 Aba9102_RS12410 WP_001214060.1 2536318..2536791(+) (fimU) [Acinetobacter baumannii strain 9102]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTSTLAFNANGVVANITQDTLLSICNFRINKKKVIILTKLGTLVFKAEETC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTSTLAFNANGVVANITQDTLLSICNFRINKKKVIILTKLGTLVFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=244278 Aba9102_RS12410 WP_001214060.1 2536318..2536791(+) (fimU) [Acinetobacter baumannii strain 9102]
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTAGCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTTTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTAGCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTTTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
98.726 |
100 |
0.987 |