Detailed information
Bioinformatically predicted
Overview
| Name | hns | Type | Regulator |
| Locus tag | Aba10042_RS17405 | Genome accession | NZ_CP023026 |
| Coordinates | 3575334..3575660 (-) | Length | 108 a.a. |
| NCBI ID | WP_000801427.1 | Uniprot ID | N9J3X5 |
| Organism | Acinetobacter baumannii strain 10042 | ||
| Function | repress the expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3570334..3580660
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Aba10042_RS17385 (Aba10042_17340) | - | 3570434..3571063 (-) | 630 | WP_000219967.1 | FHA domain-containing protein | - |
| Aba10042_RS17390 (Aba10042_17345) | gspD | 3571104..3573380 (-) | 2277 | WP_001196426.1 | type II secretion system secretin GspD | - |
| Aba10042_RS17395 (Aba10042_17350) | - | 3573422..3574258 (-) | 837 | WP_000870033.1 | type II secretion system protein N | - |
| Aba10042_RS17400 (Aba10042_17355) | gspN | 3574258..3575001 (-) | 744 | WP_000730343.1 | type II secretion system protein N | - |
| Aba10042_RS17405 (Aba10042_17360) | hns | 3575334..3575660 (-) | 327 | WP_000801427.1 | H-NS family nucleoid-associated regulatory protein | Regulator |
| Aba10042_RS17410 (Aba10042_17365) | - | 3575855..3576295 (-) | 441 | WP_000661570.1 | acyl-CoA thioesterase | - |
| Aba10042_RS17415 (Aba10042_17370) | - | 3576303..3577496 (-) | 1194 | WP_000681783.1 | hypothetical protein | - |
| Aba10042_RS17420 (Aba10042_17375) | - | 3577506..3578345 (-) | 840 | WP_001230204.1 | hypothetical protein | - |
| Aba10042_RS17425 (Aba10042_17380) | - | 3578354..3579121 (-) | 768 | WP_000897421.1 | uroporphyrinogen-III synthase | - |
| Aba10042_RS17430 (Aba10042_17385) | hemC | 3579126..3580043 (-) | 918 | WP_031944971.1 | hydroxymethylbilane synthase | - |
Sequence
Protein
Download Length: 108 a.a. Molecular weight: 12462.12 Da Isoelectric Point: 5.0524
>NTDB_id=244238 Aba10042_RS17405 WP_000801427.1 3575334..3575660(-) (hns) [Acinetobacter baumannii strain 10042]
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI
Nucleotide
Download Length: 327 bp
>NTDB_id=244238 Aba10042_RS17405 WP_000801427.1 3575334..3575660(-) (hns) [Acinetobacter baumannii strain 10042]
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAGATTGCTGAAAATGTAGGTTTTAGTGTTGAACAACTTC
TAGAATTTGGCGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGTTACCGTAACAAAAACAATGCTGAA
GAGACTTGGACGGGTCGCGGTAAACAACCACGTTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAGATTGCTGAAAATGTAGGTTTTAGTGTTGAACAACTTC
TAGAATTTGGCGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGTTACCGTAACAAAAACAATGCTGAA
GAGACTTGGACGGGTCGCGGTAAACAACCACGTTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| hns | Acinetobacter baumannii strain A118 |
100 |
100 |
1 |