Detailed information
Bioinformatically predicted
Overview
| Name | pilW | Type | Machinery gene |
| Locus tag | Aba10324_RS09365 | Genome accession | NZ_CP023022 |
| Coordinates | 1928088..1929089 (-) | Length | 333 a.a. |
| NCBI ID | WP_000079199.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain 10324 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1923088..1934089
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Aba10324_RS09330 (Aba10324_09335) | - | 1923101..1924135 (+) | 1035 | WP_001189446.1 | lipase secretion chaperone | - |
| Aba10324_RS09335 (Aba10324_09340) | - | 1924250..1925191 (+) | 942 | WP_085916958.1 | lipase family alpha/beta hydrolase | - |
| Aba10324_RS09340 (Aba10324_09345) | rplS | 1925243..1925611 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| Aba10324_RS09345 (Aba10324_09350) | trmD | 1925819..1926559 (-) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| Aba10324_RS09350 (Aba10324_09355) | rimM | 1926605..1927153 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| Aba10324_RS09355 (Aba10324_09360) | rpsP | 1927173..1927424 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| Aba10324_RS19395 (Aba10324_09365) | - | 1927571..1927900 (-) | 330 | Protein_1828 | type IV pilin protein | - |
| Aba10324_RS19425 | - | 1927870..1928091 (-) | 222 | Protein_1829 | PilX N-terminal domain-containing pilus assembly protein | - |
| Aba10324_RS09365 (Aba10324_09370) | pilW | 1928088..1929089 (-) | 1002 | WP_000079199.1 | PilW family protein | Machinery gene |
| Aba10324_RS09370 (Aba10324_09375) | pilV | 1929090..1929650 (-) | 561 | WP_002194578.1 | type IV pilus modification protein PilV | Machinery gene |
| Aba10324_RS09375 (Aba10324_09380) | fimU | 1929644..1930117 (-) | 474 | WP_001214068.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| Aba10324_RS09380 (Aba10324_09385) | ispH | 1930287..1931237 (-) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| Aba10324_RS09385 (Aba10324_09390) | gmk | 1931360..1931989 (+) | 630 | WP_000015936.1 | guanylate kinase | - |
| Aba10324_RS09390 (Aba10324_09395) | rpoZ | 1932062..1932340 (+) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| Aba10324_RS09395 | - | 1932379..1932509 (+) | 131 | Protein_1836 | hypothetical protein | - |
Sequence
Protein
Download Length: 333 a.a. Molecular weight: 35899.59 Da Isoelectric Point: 6.3350
>NTDB_id=244166 Aba10324_RS09365 WP_000079199.1 1928088..1929089(-) (pilW) [Acinetobacter baumannii strain 10324]
MAQSFISNKEQGFTLIELIVALALGLILVAAATQLFIGGLLSSRLQKANAEIQDSGIFGLEYMARDIRLLNYGNVVNPQL
TDTTPWGGIVLTGSTATNANNINFIPKVDTNTYIPEALLSRGAGDTVSTVNNHWKGLSNIQNSSNAEVQSDQLTIQFIAP
TNMTNCEGVNVLAGDLIVQRYFLRVDNNGSSQQDYALACDANTPAVSATAQPDIVNGLGDAGQIILPRIDHFHVLLGTKN
AAGNFAYYTIPQYRVAAQAARDASPTVAAPRILSIQISVLARSTNNAQNKAIDPNQSFLMLDQHVHAADNRNRFLRRVYS
VTIALRNAMGETI
MAQSFISNKEQGFTLIELIVALALGLILVAAATQLFIGGLLSSRLQKANAEIQDSGIFGLEYMARDIRLLNYGNVVNPQL
TDTTPWGGIVLTGSTATNANNINFIPKVDTNTYIPEALLSRGAGDTVSTVNNHWKGLSNIQNSSNAEVQSDQLTIQFIAP
TNMTNCEGVNVLAGDLIVQRYFLRVDNNGSSQQDYALACDANTPAVSATAQPDIVNGLGDAGQIILPRIDHFHVLLGTKN
AAGNFAYYTIPQYRVAAQAARDASPTVAAPRILSIQISVLARSTNNAQNKAIDPNQSFLMLDQHVHAADNRNRFLRRVYS
VTIALRNAMGETI
Nucleotide
Download Length: 1002 bp
>NTDB_id=244166 Aba10324_RS09365 WP_000079199.1 1928088..1929089(-) (pilW) [Acinetobacter baumannii strain 10324]
ATGGCTCAATCATTTATTTCTAATAAAGAACAAGGTTTTACCTTGATTGAACTTATAGTCGCCTTAGCTTTAGGCCTAAT
ATTAGTGGCTGCTGCAACACAGCTATTTATTGGAGGGCTTTTATCGAGCCGATTGCAAAAGGCTAATGCTGAAATCCAGG
ACAGCGGTATTTTTGGTTTGGAATATATGGCACGTGATATACGGCTTCTAAATTATGGAAATGTTGTAAATCCACAATTA
ACAGATACAACGCCTTGGGGAGGTATTGTATTAACAGGTTCAACAGCAACAAATGCCAACAATATTAATTTTATTCCAAA
AGTTGATACAAATACTTATATTCCGGAAGCGTTATTAAGCCGTGGTGCAGGTGATACGGTAAGTACAGTGAATAACCACT
GGAAAGGTCTTTCAAATATACAGAATAGTTCAAATGCTGAAGTACAAAGCGATCAACTGACTATTCAATTCATTGCCCCG
ACCAATATGACTAATTGTGAAGGTGTGAATGTGTTAGCGGGGGACCTAATAGTTCAACGGTATTTTTTACGTGTTGATAA
TAATGGTAGCTCTCAACAGGATTATGCACTTGCATGTGATGCGAATACCCCTGCGGTTAGTGCTACAGCTCAACCTGATA
TCGTTAATGGATTAGGAGATGCAGGCCAAATTATACTGCCTCGTATTGACCATTTTCATGTCTTATTAGGTACGAAAAAC
GCAGCTGGTAATTTTGCTTATTACACAATTCCTCAGTATCGGGTGGCTGCACAAGCTGCTCGAGATGCGAGTCCAACTGT
GGCTGCTCCAAGAATTCTGTCAATACAAATATCGGTATTAGCCCGTTCTACAAATAATGCTCAAAATAAGGCAATAGACC
CTAATCAGTCTTTTCTTATGCTAGATCAGCATGTGCATGCTGCTGATAACAGAAATCGCTTTTTGCGACGCGTATATAGC
GTGACAATTGCTTTACGCAATGCAATGGGGGAAACAATATGA
ATGGCTCAATCATTTATTTCTAATAAAGAACAAGGTTTTACCTTGATTGAACTTATAGTCGCCTTAGCTTTAGGCCTAAT
ATTAGTGGCTGCTGCAACACAGCTATTTATTGGAGGGCTTTTATCGAGCCGATTGCAAAAGGCTAATGCTGAAATCCAGG
ACAGCGGTATTTTTGGTTTGGAATATATGGCACGTGATATACGGCTTCTAAATTATGGAAATGTTGTAAATCCACAATTA
ACAGATACAACGCCTTGGGGAGGTATTGTATTAACAGGTTCAACAGCAACAAATGCCAACAATATTAATTTTATTCCAAA
AGTTGATACAAATACTTATATTCCGGAAGCGTTATTAAGCCGTGGTGCAGGTGATACGGTAAGTACAGTGAATAACCACT
GGAAAGGTCTTTCAAATATACAGAATAGTTCAAATGCTGAAGTACAAAGCGATCAACTGACTATTCAATTCATTGCCCCG
ACCAATATGACTAATTGTGAAGGTGTGAATGTGTTAGCGGGGGACCTAATAGTTCAACGGTATTTTTTACGTGTTGATAA
TAATGGTAGCTCTCAACAGGATTATGCACTTGCATGTGATGCGAATACCCCTGCGGTTAGTGCTACAGCTCAACCTGATA
TCGTTAATGGATTAGGAGATGCAGGCCAAATTATACTGCCTCGTATTGACCATTTTCATGTCTTATTAGGTACGAAAAAC
GCAGCTGGTAATTTTGCTTATTACACAATTCCTCAGTATCGGGTGGCTGCACAAGCTGCTCGAGATGCGAGTCCAACTGT
GGCTGCTCCAAGAATTCTGTCAATACAAATATCGGTATTAGCCCGTTCTACAAATAATGCTCAAAATAAGGCAATAGACC
CTAATCAGTCTTTTCTTATGCTAGATCAGCATGTGCATGCTGCTGATAACAGAAATCGCTTTTTGCGACGCGTATATAGC
GTGACAATTGCTTTACGCAATGCAATGGGGGAAACAATATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilW | Acinetobacter baumannii D1279779 |
98.799 |
100 |
0.988 |