Detailed information    

insolico Bioinformatically predicted

Overview

Name   chpA   Type   Regulator
Locus tag   Aba9201_RS16975 Genome accession   NZ_CP023020
Coordinates   3452785..3457305 (+) Length   1506 a.a.
NCBI ID   WP_000658906.1    Uniprot ID   A0A427QYU2
Organism   Acinetobacter baumannii strain 9201     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3447785..3462305
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Aba9201_RS16950 (Aba9201_16925) - 3448226..3448864 (-) 639 WP_002027721.1 hypothetical protein -
  Aba9201_RS16955 (Aba9201_16930) pilG 3449147..3449530 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  Aba9201_RS16960 (Aba9201_16935) - 3449554..3449916 (+) 363 WP_000101096.1 PleD family two-component system response regulator -
  Aba9201_RS16965 (Aba9201_16940) - 3449977..3450513 (+) 537 WP_000729759.1 chemotaxis protein CheW -
  Aba9201_RS16970 (Aba9201_16945) - 3450560..3452638 (+) 2079 WP_000505936.1 methyl-accepting chemotaxis protein -
  Aba9201_RS16975 (Aba9201_16950) chpA 3452785..3457305 (+) 4521 WP_000658906.1 Hpt domain-containing protein Regulator
  Aba9201_RS16980 (Aba9201_16955) - 3457302..3457766 (+) 465 WP_000678923.1 hypothetical protein -
  Aba9201_RS16985 (Aba9201_16960) dapE 3457802..3458938 (-) 1137 WP_001016582.1 succinyl-diaminopimelate desuccinylase -
  Aba9201_RS16990 (Aba9201_16965) - 3459064..3459207 (-) 144 WP_001984826.1 entericidin A/B family lipoprotein -
  Aba9201_RS16995 (Aba9201_16970) - 3459306..3460214 (-) 909 WP_001017532.1 DUF1853 family protein -
  Aba9201_RS17000 (Aba9201_16975) - 3460319..3460687 (+) 369 WP_001259501.1 YbaN family protein -
  Aba9201_RS17005 (Aba9201_16980) elsL 3460838..3461341 (+) 504 WP_000077302.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence

Protein


Download         Length: 1506 a.a.        Molecular weight: 171596.64 Da        Isoelectric Point: 4.2945

>NTDB_id=244152 Aba9201_RS16975 WP_000658906.1 3452785..3457305(+) (chpA) [Acinetobacter baumannii strain 9201]
MKEILKTLTEAMTLPEDSYSEQDAEFLEIFIEEIEEIFVDLQPLINTWMQSENIATLTEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQSLQLTPTIQSYVQLVFKFYFLKLVDNFKQKRAHTLDFRPLILLGQQLQQQQSLEPALEELLQLS
NTLTAETVTGLELDYIEQDSLAEPIIQATHTEIEINLDETLTLFMEEAEEHLATIHQFLDQELHQYDSYNALIRALHTLR
GSSAMAQVETIFEASTKVEHLFKILLQEELSSHSEEILLLQEYREFVRDSLELLSRYSSSEQLEARLQQFNQSWDAYVEQ
HGDRTDPLMPSHGLVSQLLQLDVSELLDAELDFEKGIRNEFPDYLERLSEQADLLLQHTHSQAMLGLHEYTSQLKESYEV
LLDKPALLQSDYIFEIYQKAHQQLIQLFDALAAGQRVGVVKQHQSILEELKLYTQYTPDISNDLPQQDSTSFEPISNIEP
EPEVVATVENFSDSVDWAVLGQSVQQDRQYISSTQVNRNFDADLLDIFLEEAEELLEGIDTDLNIWVGEQENFAALNNLM
RYLHTLKGGANMVQATYLGLIAHELESIYERLIQKQLVATSDLIDFIRLVQDDLADRLQIMREQQLDYAAPYTINALKRA
GQNSNFQPLPVVDAFDTESEIFSEQEVISEVIIDEIPVELEPALAELEAHHDQVFDTAVTELATPVEVITSVTSQEREVA
ADEQDIEAVVEQTFLEEATELLEMAESLLKQWFEQRTNRSILLQLQRAVHSLKGGARMVGLETVQAIAYQLENAFEQFAL
HHFNSNIYDHLLESAIAWLKDAIFNHNYQHFDGLQQSLENIQFFETTIQIPTKLTRADLFSSEPVMTFIQGDGTEPPSMM
GAWEQTERLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFNHTLVEMELAIQRLADQLRRMEGELETQIIAKH
GIEHSRYTDFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSDKIRDTESLLLQQSRIQAEIQEGLMRTRLVPFSRLLP
RLQRIVRQTSTALNRPAELFVNNTEGELDRNILERLVTPLEHMLRNAIDHGLEDRAQRQQANKPETGRIELNIQRQGTDV
VVVFSDDGQGIDVEKVRQKALLAGLIKPEQDLEQQDILQLIFHPGLSTAEQVTQISGRGVGLDVVQSDIKSLGGHVSVES
VYGQGTTFTIRVPTTVAVSDALMVKVADQQFAIPLAQIERIIRVSPASLEQYFESPQELFEYENKRYPLRYLSEFVGNQP
IPRLNGVMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQST
QRHKQLSEAIYRQRESDERPLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGFE
VLNLVRHHDMHQYMPIIMITSRTGEKHRERAFSLGVSQYMGKPFQEEELLENIDALLVASDSEVKS

Nucleotide


Download         Length: 4521 bp        

>NTDB_id=244152 Aba9201_RS16975 WP_000658906.1 3452785..3457305(+) (chpA) [Acinetobacter baumannii strain 9201]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGACGCTACCTGAAGATAGCTATTCTGAACAAGATGCTGAGTTTCT
TGAGATTTTCATTGAAGAAATTGAAGAGATTTTTGTTGATTTGCAACCTTTGATAAATACATGGATGCAGTCTGAGAATA
TTGCTACGCTCACTGAAATTCGTCGTCATTTCCATACCTTAAAAGGTTCCGGAAGAATGATTGGCGCTAAATCTTCAGCT
GAGCTTGCGTGGACAGTTGAAGATACACTCAACCGGGTAATCAACCAAAGCTTACAATTAACGCCAACTATTCAGAGCTA
TGTGCAGTTAGTATTTAAGTTCTATTTCCTTAAATTAGTAGATAATTTTAAGCAAAAACGAGCACATACCTTAGATTTCA
GACCTCTTATTTTATTAGGCCAACAACTACAACAACAGCAAAGTTTAGAGCCAGCTTTAGAAGAGCTTTTACAACTTTCA
AATACGCTTACGGCCGAAACAGTGACTGGTCTTGAGCTAGATTATATTGAACAAGATTCATTAGCCGAGCCAATCATTCA
AGCTACACATACTGAAATTGAAATAAATCTAGATGAAACTTTGACCTTATTTATGGAAGAGGCGGAAGAACATTTAGCCA
CGATTCATCAATTCTTAGATCAAGAGTTACATCAGTACGACAGTTATAACGCTTTAATCCGCGCTTTACATACTTTGCGT
GGTAGCTCTGCAATGGCACAGGTCGAAACAATTTTCGAGGCCAGTACCAAAGTTGAGCATTTATTTAAAATACTGCTGCA
AGAAGAGTTATCTTCTCACTCTGAAGAAATTTTATTATTACAAGAATATCGTGAGTTTGTTCGAGATAGCTTGGAACTAC
TATCTAGATATAGTTCAAGTGAACAGCTCGAAGCGAGATTGCAGCAATTTAATCAATCTTGGGATGCATATGTTGAGCAG
CATGGTGACCGAACAGATCCGTTAATGCCTTCTCATGGCTTGGTATCGCAATTATTACAATTAGATGTTTCTGAATTATT
GGATGCAGAATTAGATTTTGAGAAGGGAATTCGTAATGAGTTTCCTGATTACCTTGAACGCCTAAGTGAACAGGCTGACT
TATTACTGCAGCATACACATTCTCAAGCAATGCTGGGTTTACATGAATATACCAGCCAACTGAAAGAAAGTTATGAAGTG
CTGCTTGATAAACCTGCGTTATTACAATCAGACTATATATTTGAAATTTATCAAAAAGCGCATCAACAGCTCATTCAATT
ATTTGATGCTTTAGCTGCTGGTCAGCGAGTCGGTGTTGTTAAGCAACATCAAAGTATTTTAGAAGAATTAAAACTTTATA
CGCAGTACACTCCAGACATATCAAATGACCTGCCTCAGCAGGATTCGACATCTTTTGAACCAATATCTAATATTGAACCA
GAGCCAGAAGTAGTAGCTACTGTAGAGAATTTCTCAGACTCTGTAGACTGGGCGGTATTAGGTCAAAGTGTGCAGCAAGA
TCGACAATATATTTCATCTACACAAGTGAATCGAAATTTTGATGCTGATCTTTTAGATATCTTTCTTGAGGAAGCTGAAG
AATTACTTGAGGGAATTGATACCGATCTTAATATTTGGGTAGGTGAGCAAGAAAACTTTGCAGCTCTGAACAACCTAATG
CGTTATTTGCATACCTTGAAAGGGGGAGCAAATATGGTTCAGGCAACGTATCTTGGTTTGATTGCCCATGAATTAGAAAG
CATCTATGAGCGTTTAATTCAAAAGCAATTAGTGGCAACTTCAGATTTAATTGATTTTATTCGTTTGGTTCAAGATGACT
TGGCTGACCGTTTACAAATCATGCGTGAACAACAACTAGATTATGCAGCCCCTTACACAATTAACGCATTAAAACGAGCG
GGTCAAAACTCTAACTTCCAACCTTTACCAGTGGTTGACGCATTTGATACTGAAAGTGAGATATTCTCTGAGCAAGAGGT
GATATCTGAAGTAATAATAGATGAGATACCAGTAGAACTTGAGCCTGCTCTTGCAGAATTAGAAGCTCATCACGATCAGG
TATTCGATACAGCGGTTACCGAGTTAGCTACTCCAGTTGAAGTGATTACCTCGGTTACATCGCAAGAGCGTGAAGTTGCA
GCTGATGAACAGGACATTGAGGCTGTTGTTGAACAGACGTTCCTGGAAGAAGCTACTGAATTGTTAGAAATGGCTGAATC
GCTATTAAAACAATGGTTTGAACAGCGTACAAACCGTAGTATTTTGCTTCAGCTTCAAAGGGCCGTGCACAGTTTAAAAG
GTGGTGCACGGATGGTGGGTTTAGAAACCGTACAAGCAATTGCCTACCAACTAGAAAATGCTTTTGAACAATTTGCGCTA
CATCACTTCAATTCGAATATTTATGATCATTTATTAGAAAGTGCGATTGCATGGTTAAAAGATGCAATTTTCAACCACAA
TTATCAGCATTTCGATGGATTACAGCAAAGTTTAGAAAATATTCAATTCTTTGAAACTACAATCCAGATTCCGACTAAGT
TAACTAGAGCGGACTTGTTTAGCTCAGAACCAGTGATGACCTTTATACAAGGTGATGGTACAGAGCCTCCATCAATGATG
GGAGCGTGGGAGCAAACAGAGCGTCTGGATCAGAATAATGAAATGATCCGTGTTTCAGCCGACTTAATCGAGAAAATGAT
TGATTTGTCTGGTGAAAACTCCATTAACCGTTCACGAATTGAAATGGACCTAAGCCAATTTAACCATACATTGGTTGAAA
TGGAGTTGGCGATTCAACGGCTTGCCGATCAGTTACGTCGAATGGAAGGTGAGTTAGAAACACAGATTATTGCTAAACAT
GGAATTGAACATTCTCGTTATACCGACTTTGATCCGTTAGAGATGGACCAGTATTCATCTTTAAATCAATTGTCGAAATC
GCTTGCTGAATCTGCATCGGACTTGGTCGACTTTAAAAATACGTTATCTGACAAAATCAGAGATACCGAAAGTTTGCTTT
TACAACAATCACGAATTCAAGCGGAAATTCAAGAAGGCTTAATGCGGACACGTTTGGTCCCATTTTCGCGTTTATTGCCT
CGGTTACAGCGAATTGTTCGTCAGACGTCTACAGCATTGAATAGACCTGCTGAGCTTTTCGTAAATAATACGGAAGGTGA
GTTGGACCGCAACATTTTAGAACGATTAGTGACTCCGCTTGAGCATATGCTCAGAAACGCAATTGACCATGGTTTAGAGG
ACCGAGCGCAGCGGCAACAAGCAAATAAACCGGAAACAGGGCGTATTGAACTTAATATTCAGCGTCAAGGTACGGATGTT
GTGGTTGTCTTTAGTGATGATGGTCAAGGTATTGATGTTGAAAAAGTACGTCAGAAAGCCCTCCTTGCCGGATTGATCAA
GCCAGAACAAGACTTAGAACAGCAAGACATACTGCAACTCATTTTCCATCCGGGTTTAAGTACAGCAGAGCAAGTCACTC
AGATTTCCGGACGTGGTGTAGGTCTTGATGTCGTGCAGAGTGATATTAAGTCTTTGGGGGGACACGTCAGCGTTGAATCC
GTCTATGGGCAGGGAACAACATTTACGATTCGCGTACCGACTACAGTAGCGGTAAGTGATGCCTTAATGGTTAAAGTGGC
AGATCAACAATTTGCGATTCCACTTGCTCAAATCGAACGAATTATTCGAGTGTCACCAGCCTCTTTAGAGCAGTATTTTG
AAAGTCCTCAAGAACTATTTGAGTATGAAAATAAACGTTATCCATTACGTTATCTTTCAGAATTTGTTGGCAACCAACCC
ATACCACGTCTAAATGGCGTGATGTATTCATTACCTGTGTTAATGATTAAAGCCAATAATGGCCAAACTGTGGCACTACT
TGTTGACCAGTTAATTGGCTCTCGAGCGCAAATTGTAGTGAAACCAATTGGTCAACAGTTCTCTAGCATTGGGGCAATTG
CAGGCGCCACAATTTTAGGTGATGGACAGGTCTGCTTAATTTTAGACGGACAAAATATTGCGCGACAAATTCAGTCAACT
CAGCGTCATAAACAACTTAGTGAAGCAATATATAGACAACGAGAGTCTGATGAACGCCCTCTCATCATGATTGTAGATGA
CTCAGTAACTGTGCGTAAGGTCACTTCCCGATTACTTGAACGCCAAGGCTATGATGTGGTTACGGCTAAAGATGGTGTTG
ACGCCATAGAGCAGCTAGAAAATATTAAGCCAGATTTGATGCTACTTGATATTGAAATGCCACGTATGGATGGTTTTGAG
GTTCTCAATCTTGTACGACATCATGATATGCATCAATACATGCCAATTATTATGATTACATCCAGAACAGGCGAAAAACA
TCGTGAACGAGCATTCTCGTTAGGTGTAAGTCAATATATGGGTAAACCTTTCCAGGAAGAAGAGTTACTAGAGAATATCG
ATGCTTTACTTGTAGCGTCTGACAGTGAGGTCAAATCATGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(1382-1493)

Hpt domain (Hpt)

(732-796)

Hpt domain (Hpt)

(523-612)

Hpt domain (Hpt)

(199-281)

Hpt domain (Hpt)

(25-106)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(1078-1214)

CheW-like domain (CheW)

(1221-1356)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

98.34

100

0.983

Multiple sequence alignment