Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   A6J73_RS12345 Genome accession   NZ_CP023011
Coordinates   2721745..2723424 (-) Length   559 a.a.
NCBI ID   WP_010719788.1    Uniprot ID   A0A1V8X977
Organism   Enterococcus hirae strain FDAARGOS_234     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2716745..2728424
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J73_RS12315 (A6J73_12335) ftsL 2717773..2718168 (-) 396 WP_094940965.1 cell division protein FtsL -
  A6J73_RS12320 (A6J73_12340) rsmH 2718173..2719132 (-) 960 WP_053766114.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  A6J73_RS12325 (A6J73_12345) mraZ 2719153..2719584 (-) 432 WP_014834189.1 division/cell wall cluster transcriptional repressor MraZ -
  A6J73_RS12330 (A6J73_12350) - 2719756..2720124 (-) 369 WP_010719785.1 DUF3397 domain-containing protein -
  A6J73_RS12335 (A6J73_12355) - 2720380..2721336 (+) 957 WP_010719786.1 magnesium transporter CorA family protein -
  A6J73_RS12340 (A6J73_12360) - 2721406..2721522 (+) 117 WP_010719787.1 DUF4044 domain-containing protein -
  A6J73_RS12345 (A6J73_12365) recN 2721745..2723424 (-) 1680 WP_010719788.1 DNA repair protein RecN Machinery gene
  A6J73_RS12350 (A6J73_12370) argR 2723442..2723891 (-) 450 WP_010719789.1 arginine repressor -
  A6J73_RS12355 (A6J73_12375) - 2723991..2724809 (-) 819 WP_094940964.1 TlyA family RNA methyltransferase -
  A6J73_RS12360 (A6J73_12380) - 2724824..2725708 (-) 885 WP_010719791.1 polyprenyl synthetase family protein -
  A6J73_RS12365 (A6J73_12385) - 2725708..2725932 (-) 225 WP_010719792.1 exodeoxyribonuclease VII small subunit -
  A6J73_RS12370 (A6J73_12390) xseA 2725938..2727278 (-) 1341 WP_034698802.1 exodeoxyribonuclease VII large subunit -
  A6J73_RS12375 (A6J73_12395) - 2727279..2728124 (-) 846 WP_094940963.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -

Sequence

Protein


Download         Length: 559 a.a.        Molecular weight: 63022.25 Da        Isoelectric Point: 4.5725

>NTDB_id=244084 A6J73_RS12345 WP_010719788.1 2721745..2723424(-) (recN) [Enterococcus hirae strain FDAARGOS_234]
MLQEISITNFAIIPELHLSFHKGMTALTGETGAGKSIIIDALGLLAGGRGSSDYIRQGADKCILEGLFEWPSQEGFTELM
EELGIESDGDNLIVRRDMALTGKNVCRVNGHIVTLANLRRIGSYLVDIQGQNEHQELLQPEAHLNLLDRFGDRTFQQQKK
KYQKEYAIYRELERKMRKVQQNEKSFVQRIDMLHFQQEEIAAADLQVGEEEQLSEEREKLSNYQKIVDSFASGYSALSAG
EPSSVDNVGLAVSELQSIAHLDNEYEAIVENVQSAYYLLQDAIGDMSRQIDLLELDENRLEEVNQRLELIRQLKRKYGES
VEAILDYYEEITKELDSSDFSEGQLEKMQLELTKKETFLQEQALALHKTRKKIAKELEKSILTELKSLYMENTEFEVRFS
SEKNGQLDANGLDQVEFYITTNPGEPLKPLVKVASGGELSRMLLALKTIFSSEQGVTSIIFDEVDTGVSGRVAQAIADKI
SQISCHSQVLCITHLPQVAAVADFQYYIQKEVIDGRTQTSVTELQPTQRETEIARMLAGSEITPLTVEHAKELLRLASK

Nucleotide


Download         Length: 1680 bp        

>NTDB_id=244084 A6J73_RS12345 WP_010719788.1 2721745..2723424(-) (recN) [Enterococcus hirae strain FDAARGOS_234]
TTGTTACAAGAGATCAGTATTACTAATTTTGCGATTATTCCGGAATTGCATTTGTCTTTCCATAAAGGAATGACAGCTCT
AACTGGCGAGACCGGGGCAGGTAAATCGATTATCATTGATGCCCTTGGATTACTGGCTGGTGGTAGAGGCTCCAGTGATT
ATATTCGCCAAGGAGCCGATAAGTGTATCTTAGAAGGGTTGTTTGAATGGCCAAGTCAAGAAGGATTTACTGAATTGATG
GAAGAACTGGGCATCGAATCAGATGGTGATAACTTGATTGTTCGTCGTGATATGGCATTAACGGGTAAAAATGTCTGCCG
AGTCAATGGACATATTGTTACGCTGGCAAACCTTAGAAGGATCGGAAGTTATCTAGTTGATATTCAAGGACAAAATGAAC
ACCAGGAGCTATTACAACCAGAAGCCCATTTAAATTTATTGGATCGTTTTGGTGATCGTACTTTTCAACAACAAAAGAAA
AAATATCAAAAAGAGTATGCTATCTATCGTGAGCTCGAACGAAAAATGCGGAAAGTCCAACAAAATGAAAAATCATTTGT
TCAACGGATCGACATGCTTCATTTTCAACAAGAAGAAATCGCAGCAGCGGATTTACAAGTTGGCGAAGAGGAACAGTTAA
GCGAGGAAAGAGAAAAATTAAGCAATTATCAAAAGATCGTGGATAGTTTTGCTAGTGGTTATAGTGCATTGAGTGCGGGA
GAACCCAGTAGTGTGGATAACGTTGGTTTAGCTGTTTCTGAACTACAAAGCATTGCTCATCTAGATAATGAATATGAAGC
AATCGTTGAGAATGTTCAAAGTGCTTATTATTTACTTCAAGATGCCATTGGTGATATGAGTCGCCAAATCGATCTGCTGG
AATTGGATGAAAACCGATTAGAAGAAGTCAATCAACGGCTTGAATTGATTCGTCAGTTGAAACGCAAATATGGGGAGTCA
GTGGAAGCAATCCTTGATTATTACGAAGAAATCACTAAAGAACTGGATTCTTCTGATTTCTCAGAAGGTCAACTAGAAAA
AATGCAACTGGAATTAACTAAAAAAGAAACGTTCTTGCAAGAACAAGCATTAGCACTGCATAAAACAAGAAAAAAAATTG
CTAAAGAACTAGAAAAATCAATCTTAACGGAATTAAAAAGTCTATATATGGAAAACACGGAGTTTGAAGTCCGTTTTTCA
TCTGAAAAAAATGGACAATTAGATGCTAATGGATTGGACCAAGTGGAATTTTACATAACCACAAATCCTGGAGAACCATT
GAAGCCATTAGTAAAAGTTGCCTCAGGTGGGGAACTATCACGTATGTTGTTGGCGTTAAAAACTATTTTTTCTTCAGAAC
AAGGTGTGACTAGTATCATTTTTGATGAAGTGGATACAGGAGTAAGCGGTCGAGTTGCCCAAGCGATTGCAGATAAGATC
TCACAGATCTCATGTCACTCACAAGTTTTGTGTATCACCCATCTACCGCAAGTCGCTGCAGTTGCCGATTTTCAATACTA
TATTCAAAAAGAAGTCATTGATGGGCGTACCCAAACATCGGTTACCGAACTACAACCCACACAACGAGAGACCGAAATTG
CCCGAATGTTAGCAGGAAGTGAAATTACCCCACTAACAGTCGAGCATGCCAAAGAATTATTACGCTTAGCAAGTAAATAG

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-510)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1V8X977

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

49.476

100

0.506

Multiple sequence alignment