Detailed information NTG0243862

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: CGB83_RS12285
• Genome accession: NZ_CP022986
• Coordinates: 2669651..2670760 (+)
• Length: 369 a.a.
• NCBI ID: WP_100076044.1
• Uniprot ID: -
• Organism: Chryseobacterium camelliae strain Dolsongi-HT1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2664651..2675760

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CGB83_RS12255	-	2664878..2665384 (+)	507	WP_100076039.1	GNAT family N-acetyltransferase	-
CGB83_RS12260	sufC	2665403..2666146 (+)	744	WP_100076040.1	Fe-S cluster assembly ATPase SufC	-
CGB83_RS12265	sufD	2666288..2667595 (+)	1308	WP_100077586.1	Fe-S cluster assembly protein SufD	-
CGB83_RS12270	-	2667668..2668594 (-)	927	WP_100076041.1	DUF3078 domain-containing protein	-
CGB83_RS12280	-	2668849..2669616 (+)	768	WP_100076043.1	rhomboid family intramembrane serine protease	-
CGB83_RS12285	dprA	2669651..2670760 (+)	1110	WP_100076044.1	DNA-processing protein DprA	Machinery gene
CGB83_RS12290	gdhA	2670951..2672309 (+)	1359	WP_100076045.1	NADP-specific glutamate dehydrogenase	-
CGB83_RS12295	-	2672482..2672802 (-)	321	WP_157761417.1	hypothetical protein	-
CGB83_RS12300	-	2672920..2673408 (-)	489	WP_100076047.1	YkgJ family cysteine cluster protein	-
CGB83_RS12305	-	2673408..2674376 (-)	969	WP_100076048.1	ion channel	-
CGB83_RS12310	-	2674496..2674876 (+)	381	WP_100076049.1	group III truncated hemoglobin	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 40858.66 Da
• Isoelectric Point: 6.2394

>NTDB_id=243862 CGB83_RS12285 WP_100076044.1 2669651..2670760(+) (dprA) [Chryseobacterium camelliae strain Dolsongi-HT1]
MISEEHLYAIALRECSLIGDINFSKLIRAFGSAKLAWEKAARELGAADGIGRKAVADIGNTDYLRFAEKEIAFCENNNIT
IKLRHLRDLPPLLNECDDAPAVLYQKGEFDHALKTVSIVGTRNITSYGKSFISTFFEETQSCRYCSVSGLALGADKEVHE
QSLNFAIPTIAVLAHGFHTLYPSKNRKLSERILDHGGALITEFNSSRKPDRENFIQRNRIIAGLSPATVVVETAFGGGSV
STATFANQYNRDVFALPGKITDPYSQGCNQLIFQHKASAISTVKDLIDQLGLNRPEERMEELFPYSALTVQLTEIQELIY
GCIKEHQPISLDDMAASTELPAYRILPVILELELLGKIKTLSGRQFTAI

Nucleotide

• Length: 1110 bp

>NTDB_id=243862 CGB83_RS12285 WP_100076044.1 2669651..2670760(+) (dprA) [Chryseobacterium camelliae strain Dolsongi-HT1]
ATGATTTCTGAAGAACACCTATATGCCATCGCGCTCCGCGAGTGCAGCCTCATTGGCGACATCAATTTCAGCAAGCTCAT
TAGAGCCTTCGGCAGTGCAAAACTTGCCTGGGAAAAAGCAGCCCGCGAGTTGGGAGCGGCAGACGGAATCGGACGTAAGG
CAGTGGCAGATATCGGCAATACAGACTACCTCAGGTTCGCAGAGAAAGAAATTGCATTCTGCGAAAACAACAACATTACG
ATCAAATTAAGGCACCTCCGTGATCTTCCTCCGCTGCTGAATGAATGTGATGATGCACCGGCTGTACTGTACCAGAAAGG
AGAATTTGATCACGCTTTGAAAACGGTGAGTATCGTTGGAACCCGGAATATAACGTCTTACGGCAAATCTTTTATAAGCA
CTTTTTTTGAGGAGACCCAATCATGCAGATACTGTTCTGTAAGCGGCCTTGCCTTAGGAGCAGACAAAGAAGTCCATGAG
CAGTCGCTGAACTTTGCTATCCCGACCATAGCGGTCCTTGCCCACGGGTTCCATACCTTATATCCTTCCAAAAACAGGAA
ACTGTCGGAAAGGATACTTGATCATGGAGGTGCACTGATCACAGAATTCAATTCTTCCCGCAAACCGGACCGGGAGAATT
TTATCCAGAGAAACAGGATCATTGCCGGATTATCGCCGGCAACGGTAGTTGTAGAAACTGCTTTCGGAGGAGGTTCTGTA
AGTACAGCTACATTTGCCAACCAATATAACCGCGATGTCTTTGCCCTTCCCGGAAAAATTACGGATCCTTACAGCCAGGG
CTGTAATCAGCTGATCTTTCAGCACAAAGCTTCTGCAATTTCTACGGTTAAGGACCTGATCGACCAGCTCGGTCTTAACC
GTCCTGAAGAGAGAATGGAGGAATTATTTCCCTACAGCGCATTAACTGTTCAGCTAACTGAAATTCAGGAACTCATTTAT
GGGTGTATTAAAGAACATCAACCGATATCCCTGGACGATATGGCAGCATCCACAGAGCTCCCGGCATACCGGATTTTACC
TGTTATTCTGGAATTGGAGCTTTTGGGGAAGATAAAAACGCTTTCCGGGAGGCAATTTACAGCAATCTGA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (309-363)

• DNA recombination-mediator protein A (DNA_processg_A) (74-279)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	52.044	99.458	0.518