Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   NTHI_RS03750 Genome accession   NC_007146
Coordinates   734850..735146 (-) Length   98 a.a.
NCBI ID   WP_005650837.1    Uniprot ID   Q4QMQ7
Organism   Haemophilus influenzae 86-028NP     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 729850..740146
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NTHI_RS03725 (NTHI0775) - 730062..730814 (-) 753 WP_011272149.1 DUF3800 domain-containing protein -
  NTHI_RS03730 (NTHI0776) aroE 730826..731632 (-) 807 WP_011272150.1 shikimate dehydrogenase -
  NTHI_RS03735 (NTHI0777) - 731636..732187 (-) 552 WP_011272151.1 Sua5/YciO/YrdC/YwlC family protein -
  NTHI_RS03740 (NTHI0778) - 732203..732739 (-) 537 WP_011272152.1 topoisomerase DNA-binding C4 zinc finger domain-containing protein -
  NTHI_RS03745 (NTHI0779) - 732749..734665 (-) 1917 WP_011272153.1 ABC transporter ATP-binding protein -
  NTHI_RS03750 (NTHI0780) HI0659 734850..735146 (-) 297 WP_005650837.1 helix-turn-helix domain-containing protein Machinery gene
  NTHI_RS03755 (NTHI0781) - 735139..735321 (-) 183 WP_005661452.1 shikimate 5-dehydrogenase -
  NTHI_RS03760 (NTHI0782) - 735591..738557 (-) 2967 WP_041174743.1 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor -
  NTHI_RS10195 - 738866..738955 (+) 90 Protein_706 ABC transporter -

Sequence

Protein


Download         Length: 98 a.a.        Molecular weight: 11092.94 Da        Isoelectric Point: 10.3139

>NTDB_id=24374 NTHI_RS03750 WP_005650837.1 734850..735146(-) (HI0659) [Haemophilus influenzae 86-028NP]
MNKISPLGSNWNEFEQQIFNEEEIRESNLRVALIKELITSRQQLGISQKQLETLSGVKQPMIARIEKGQTNPQLETLLKL
LAPLGKTLSIVPLRVKNA

Nucleotide


Download         Length: 297 bp        

>NTDB_id=24374 NTHI_RS03750 WP_005650837.1 734850..735146(-) (HI0659) [Haemophilus influenzae 86-028NP]
ATGAATAAAATCAGCCCATTAGGTTCAAATTGGAATGAGTTTGAACAGCAAATTTTCAATGAAGAAGAAATCCGCGAAAG
TAATTTACGTGTAGCCTTAATTAAAGAATTGATTACTTCTCGCCAGCAACTTGGGATTTCCCAAAAACAACTTGAAACCT
TAAGCGGTGTGAAGCAACCTATGATTGCACGCATTGAAAAAGGACAAACGAATCCTCAACTTGAAACGTTGTTAAAATTG
CTCGCTCCTTTAGGGAAAACCCTGTCGATTGTGCCTCTAAGGGTAAAAAATGCCTAA

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(41-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q4QMQ7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

100

100

1

Multiple sequence alignment