Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   CJ010_RS21080 Genome accession   NZ_CP022958
Coordinates   4547768..4548154 (+) Length   128 a.a.
NCBI ID   WP_141019867.1    Uniprot ID   A0A4Y6KY09
Organism   Azoarcus sp. DD4     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4542768..4553154
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CJ010_RS21055 (CJ010_20995) pepA 4543681..4544517 (+) 837 WP_141019863.1 flocculation-associated PEP-CTERM protein PepA -
  CJ010_RS21060 (CJ010_21000) hemL 4544575..4545855 (-) 1281 WP_141019864.1 glutamate-1-semialdehyde 2,1-aminomutase -
  CJ010_RS21065 (CJ010_21005) thiE 4545929..4546552 (-) 624 WP_141019865.1 thiamine phosphate synthase -
  CJ010_RS21070 (CJ010_21010) - 4546545..4547387 (-) 843 WP_141019866.1 PfkB family carbohydrate kinase -
  CJ010_RS21075 (CJ010_21015) - 4547524..4547676 (+) 153 WP_269147345.1 rubredoxin -
  CJ010_RS21080 (CJ010_21020) pilG 4547768..4548154 (+) 387 WP_141019867.1 twitching motility response regulator PilG Regulator
  CJ010_RS21085 (CJ010_21025) - 4548180..4548545 (+) 366 WP_141019868.1 PleD family two-component system response regulator -
  CJ010_RS21090 (CJ010_21030) - 4548553..4549065 (+) 513 WP_141019869.1 chemotaxis protein CheW -
  CJ010_RS21095 (CJ010_21035) - 4549116..4551236 (+) 2121 WP_141019870.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 128 a.a.        Molecular weight: 14118.37 Da        Isoelectric Point: 7.8539

>NTDB_id=243727 CJ010_RS21080 WP_141019867.1 4547768..4548154(+) (pilG) [Azoarcus sp. DD4]
MDLTGLKVMVIDDSNTIRRSAEIFLGQSGCQVLLAEDGFDALAKIADHHPDVIFVDIMMPRLDGYQTCALIKKNPRLSST
PVIMLSSKDGLFDRARGRMVGSDEYLTKPFTKDSLLRAVATYAGRRPA

Nucleotide


Download         Length: 387 bp        

>NTDB_id=243727 CJ010_RS21080 WP_141019867.1 4547768..4548154(+) (pilG) [Azoarcus sp. DD4]
ATGGATCTGACCGGGCTCAAGGTCATGGTCATCGATGACAGCAACACCATCCGCCGCAGCGCCGAGATCTTTCTCGGCCA
GTCCGGCTGCCAGGTCCTGCTTGCCGAAGACGGTTTCGACGCACTCGCCAAGATCGCCGACCACCATCCCGACGTGATCT
TCGTCGACATCATGATGCCCCGCCTCGACGGCTATCAGACCTGCGCGCTGATCAAGAAGAATCCGCGCCTGTCGTCGACG
CCGGTGATCATGCTCTCGTCCAAGGACGGCCTCTTCGACCGGGCCCGCGGCCGCATGGTGGGGTCGGACGAGTACCTCAC
CAAACCCTTCACCAAAGACAGCCTGCTCAGGGCCGTCGCCACCTACGCCGGCCGCCGGCCGGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(8-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4Y6KY09

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

66.393

95.313

0.633

Multiple sequence alignment