Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | C9E51_RS05885 | Genome accession | NZ_CP028654 |
| Coordinates | 1180550..1181065 (+) | Length | 171 a.a. |
| NCBI ID | WP_001130215.1 | Uniprot ID | B5Z2A2 |
| Organism | Escherichia coli strain 122 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1175550..1186065
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E51_RS05840 (C9E51_06170) | csrA | 1176367..1176552 (+) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| C9E51_RS05870 (C9E51_06200) | yqaB | 1177780..1178346 (+) | 567 | WP_000273309.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| C9E51_RS05875 (C9E51_06205) | yqaA | 1178343..1178771 (+) | 429 | WP_001287450.1 | YqaA family protein | - |
| C9E51_RS05880 (C9E51_06210) | gshA | 1178844..1180400 (+) | 1557 | WP_000611787.1 | glutamate--cysteine ligase | - |
| C9E51_RS05885 (C9E51_06215) | luxS | 1180550..1181065 (+) | 516 | WP_001130215.1 | S-ribosylhomocysteine lyase | Regulator |
| C9E51_RS05890 (C9E51_06220) | emrB | 1181129..1182667 (-) | 1539 | WP_001295176.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| C9E51_RS05895 (C9E51_06225) | emrA | 1182684..1183856 (-) | 1173 | WP_001302673.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
| C9E51_RS05900 (C9E51_06230) | emrR | 1183983..1184513 (-) | 531 | WP_000378442.1 | multidrug efflux transporter EmrAB transcriptional repressor EmrR | - |
| C9E51_RS05905 (C9E51_06235) | ygaH | 1184604..1184939 (-) | 336 | WP_000119749.1 | L-valine transporter subunit YgaH | - |
| C9E51_RS05910 (C9E51_06240) | ygaZ | 1184929..1185666 (-) | 738 | WP_000445658.1 | L-valine exporter subunit YgaZ | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19444.24 Da Isoelectric Point: 5.0362
>NTDB_id=243669 C9E51_RS05885 WP_001130215.1 1180550..1181065(+) (luxS) [Escherichia coli strain 122]
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADVWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
LPKEKLQELHI
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADVWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
LPKEKLQELHI
Nucleotide
Download Length: 516 bp
>NTDB_id=243669 C9E51_RS05885 WP_001130215.1 1180550..1181065(+) (luxS) [Escherichia coli strain 122]
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGTGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGTCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATTCCGGAGCTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAGCATTCTGGAACGTGACGTGCGCATCAACAGCAACGAAGAACTGGCG
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATTTAG
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGTGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGTCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATTCCGGAGCTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAGCATTCTGGAACGTGACGTGCGCATCAACAGCAACGAAGAACTGGCG
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
72.515 |
100 |
0.725 |