Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   CJZ72_RS07220 Genome accession   NZ_CP022930
Coordinates   1514766..1516577 (+) Length   603 a.a.
NCBI ID   WP_081134913.1    Uniprot ID   -
Organism   Enterococcus durans strain BDGP3     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1509766..1521577
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CJZ72_RS07200 (CJZ72_07190) - 1510773..1511480 (-) 708 WP_005877290.1 HAD family hydrolase -
  CJZ72_RS07205 (CJZ72_07195) spxA 1512244..1512642 (+) 399 WP_005877288.1 transcriptional regulator SpxA -
  CJZ72_RS07210 (CJZ72_07200) - 1512906..1513556 (+) 651 WP_081134910.1 adaptor protein MecA -
  CJZ72_RS07215 (CJZ72_07205) - 1513656..1514669 (+) 1014 WP_095443722.1 competence protein CoiA -
  CJZ72_RS07220 (CJZ72_07210) pepF 1514766..1516577 (+) 1812 WP_081134913.1 oligoendopeptidase F Regulator
  CJZ72_RS07230 (CJZ72_07220) - 1517186..1517380 (+) 195 WP_081134918.1 hypothetical protein -
  CJZ72_RS07235 (CJZ72_07225) - 1517349..1517783 (+) 435 WP_095443723.1 DUF4809 family protein -
  CJZ72_RS07240 (CJZ72_07230) - 1517926..1519113 (-) 1188 WP_081134922.1 galactokinase -
  CJZ72_RS07245 (CJZ72_07235) - 1519116..1520150 (-) 1035 WP_081134925.1 galactose-1-epimerase -
  CJZ72_RS07250 (CJZ72_07240) - 1520401..1521306 (+) 906 WP_081134927.1 AraC family transcriptional regulator -

Sequence

Protein


Download         Length: 603 a.a.        Molecular weight: 69873.43 Da        Isoelectric Point: 4.8261

>NTDB_id=243541 CJZ72_RS07220 WP_081134913.1 1514766..1516577(+) (pepF) [Enterococcus durans strain BDGP3]
MSETTKLPKREELPEELTWDLTKIFANDQEFDQAYEKLTEELKNSDKYKGTLANSATEFLDALEFVLDVYRKIERIYVYS
SMKNDQDTANTTYQALYARSGSLLAKVSEAISWYEPEVLQLSDDQIWQYFEQEPKLELYRHYIQQMVDNRAHVLSAEQES
LLAGAGEIFGASSDIFAVLNNADLEFPTITDENGKAIQLSHGVYRQLMESTDRNVREAAFKGFFSVYEQFKNTFASTLSA
HIKGHNYKAKIRHYKSAREASLSNNHVPESVYDTLVEVVNKNLPLLHRYMSVRKRLLGVDKLHMYDLYTPVLGEAPIKFT
YEEAKAKALEALKPMGEEYLTVVEKAFSERWIDVIENKGKRSGAYSSGSYDTNPYILLNWHDALDQLFTLVHEMGHSVHS
YFTRSNQPYVYGDYPIFLAEIASTTNENILTEYLLETEEDPRVRAYVLNHYLDGFKGTIFRQTQFAEFEHFMHEEDAKGI
PLTSEYLSENYGKLNTKYYGPAVEEDPEIKYEWSRIPHFYYNYYVYQYSTGFSAASALAKKIWTKEPQALENYLTYLKSG
SSDYPVEVMKKAGVDMTKANYIEDAMVIFEKRLNELEELVEKL

Nucleotide


Download         Length: 1812 bp        

>NTDB_id=243541 CJZ72_RS07220 WP_081134913.1 1514766..1516577(+) (pepF) [Enterococcus durans strain BDGP3]
ATGAGTGAAACGACCAAATTACCAAAAAGAGAAGAATTACCTGAAGAACTAACATGGGACTTAACGAAAATCTTTGCAAA
CGATCAAGAATTCGATCAGGCTTATGAAAAATTGACTGAAGAATTAAAAAATTCTGATAAATATAAAGGGACTTTGGCAA
ATAGTGCCACAGAATTTTTGGATGCACTTGAATTTGTTTTAGATGTTTATCGAAAAATCGAACGGATCTATGTTTATTCT
AGTATGAAAAATGATCAAGATACTGCAAATACAACCTATCAAGCATTGTATGCCCGATCTGGCAGTTTATTAGCAAAAGT
GAGTGAAGCTATTTCGTGGTACGAACCAGAAGTACTTCAACTTTCAGATGACCAAATCTGGCAGTACTTTGAACAAGAAC
CAAAACTAGAACTTTATCGCCATTATATCCAACAAATGGTAGATAATAGAGCGCATGTCCTGTCTGCTGAACAAGAATCT
TTACTTGCAGGAGCAGGTGAAATATTTGGTGCTTCTAGTGATATCTTTGCGGTATTGAACAATGCTGATCTAGAGTTTCC
TACGATCACAGATGAGAATGGAAAAGCAATCCAACTTTCTCACGGTGTTTACAGACAGTTAATGGAAAGTACGGATCGCA
ATGTTCGCGAAGCAGCATTCAAAGGTTTTTTCAGTGTATATGAACAATTTAAAAATACATTTGCATCTACGTTGAGTGCG
CATATCAAAGGCCATAATTATAAAGCAAAAATCCGTCATTACAAGTCAGCTCGTGAAGCTTCTTTAAGTAACAACCATGT
TCCAGAAAGCGTGTATGATACATTAGTGGAAGTTGTCAATAAAAACTTGCCATTATTACACCGTTATATGTCTGTTCGTA
AACGTCTTTTAGGGGTAGACAAACTACACATGTACGATCTATATACACCAGTTCTAGGTGAAGCACCAATCAAGTTTACC
TATGAAGAAGCAAAAGCAAAAGCATTGGAAGCCTTAAAACCAATGGGTGAAGAATATCTGACAGTCGTTGAAAAAGCCTT
TTCAGAGCGTTGGATCGATGTAATAGAAAATAAAGGCAAACGTAGTGGCGCGTATTCTTCAGGAAGCTATGATACAAATC
CATACATTCTATTGAATTGGCATGATGCCTTGGATCAACTATTTACATTGGTACATGAAATGGGACATAGTGTCCACAGT
TACTTCACTCGTTCAAACCAACCTTATGTGTATGGGGATTATCCGATTTTCTTAGCTGAAATTGCATCAACAACGAATGA
AAATATTTTAACGGAGTACTTGTTGGAAACAGAAGAAGATCCTCGAGTACGGGCGTATGTTTTGAATCATTACCTTGATG
GATTCAAAGGTACGATATTCCGTCAAACTCAATTTGCAGAATTTGAACATTTTATGCATGAAGAGGATGCAAAAGGTATT
CCGTTGACAAGTGAATACTTGAGTGAAAATTATGGGAAACTGAATACTAAATATTATGGACCAGCTGTAGAAGAAGATCC
AGAAATCAAGTATGAATGGTCACGTATCCCTCATTTCTATTACAATTACTATGTTTATCAATATTCGACTGGATTTTCAG
CTGCCTCTGCTTTAGCGAAGAAAATCTGGACGAAAGAACCACAAGCATTAGAAAACTACCTTACTTATCTGAAGTCTGGA
AGTAGTGATTATCCCGTTGAAGTAATGAAAAAAGCGGGTGTCGATATGACGAAAGCAAATTATATCGAAGATGCAATGGT
CATATTTGAAAAACGCTTGAATGAACTAGAAGAATTAGTAGAAAAATTATAA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(117-186)

Peptidase family M3 (Peptidase_M3)

(207-587)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

56.83

98.342

0.559

Multiple sequence alignment