Detailed information    

insolico Bioinformatically predicted

Overview


Name   comGE   Type   Machinery gene
Locus tag   CGQ02_RS07150 Genome accession   NZ_CP022904
Coordinates   1391026..1391325 (-) Length   99 a.a.
NCBI ID   WP_000844410.1    Uniprot ID   A0A7R6NZL1
Organism   Staphylococcus aureus strain 629     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1386026..1396325
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CGQ02_RS07125 (CGQ02_01292) gcvPA 1387238..1388584 (-) 1347 WP_000019691.1 aminomethyl-transferring glycine dehydrogenase subunit GcvPA -
  CGQ02_RS07130 (CGQ02_01293) gcvT 1388604..1389695 (-) 1092 WP_000093349.1 glycine cleavage system aminomethyltransferase GcvT -
  CGQ02_RS07135 (CGQ02_01294) - 1389854..1390378 (-) 525 WP_001015120.1 shikimate kinase -
  CGQ02_RS07140 - 1390368..1390514 (-) 147 WP_001792109.1 hypothetical protein -
  CGQ02_RS07145 (CGQ02_01295) comGF 1390611..1391108 (-) 498 WP_001788897.1 competence type IV pilus minor pilin ComGF Machinery gene
  CGQ02_RS07150 (CGQ02_01296) comGE 1391026..1391325 (-) 300 WP_000844410.1 hypothetical protein Machinery gene
  CGQ02_RS07155 (CGQ02_01297) comGD 1391312..1391758 (-) 447 WP_001788899.1 competence type IV pilus minor pilin ComGD Machinery gene
  CGQ02_RS07160 (CGQ02_01298) comGC 1391736..1392047 (-) 312 WP_000472256.1 competence type IV pilus major pilin ComGC Machinery gene
  CGQ02_RS07165 (CGQ02_01299) comGB 1392061..1393131 (-) 1071 WP_000776422.1 competence type IV pilus assembly protein ComGB Machinery gene
  CGQ02_RS07170 (CGQ02_01300) comGA 1393103..1394077 (-) 975 WP_000697220.1 competence type IV pilus ATPase ComGA Machinery gene
  CGQ02_RS07175 (CGQ02_01301) - 1394129..1394752 (-) 624 WP_001223008.1 MBL fold metallo-hydrolase -
  CGQ02_RS07180 (CGQ02_01302) - 1394749..1395078 (-) 330 WP_001018871.1 MTH1187 family thiamine-binding protein -
  CGQ02_RS07185 (CGQ02_01303) - 1395078..1396064 (-) 987 WP_000161309.1 ROK family glucokinase -
  CGQ02_RS07190 - 1396061..1396264 (-) 204 WP_000087561.1 YqgQ family protein -

Sequence


Protein


Download         Length: 99 a.a.        Molecular weight: 11079.18 Da        Isoelectric Point: 9.9215

>NTDB_id=243192 CGQ02_RS07150 WP_000844410.1 1391026..1391325(-) (comGE) [Staphylococcus aureus strain 629]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQSIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY

Nucleotide


Download         Length: 300 bp        

>NTDB_id=243192 CGQ02_RS07150 WP_000844410.1 1391026..1391325(-) (comGE) [Staphylococcus aureus strain 629]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAATCAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7R6NZL1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGE Staphylococcus aureus N315

100

100

1

  comGE Staphylococcus aureus MW2

85.965

100

0.99


Multiple sequence alignment