Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   CGQ01_RS03830 Genome accession   NZ_CP022903
Coordinates   736201..737187 (+) Length   328 a.a.
NCBI ID   WP_000959282.1    Uniprot ID   A0A7U7EXT8
Organism   Staphylococcus aureus strain 187     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 731201..742187
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CGQ01_RS03810 (CGQ01_00680) - 731598..733202 (+) 1605 WP_000284571.1 IS1182-like element IS1182 family transposase -
  CGQ01_RS03815 (CGQ01_00681) trpS 733312..734301 (-) 990 WP_000448934.1 tryptophan--tRNA ligase -
  CGQ01_RS03820 (CGQ01_00682) spxA 734595..734990 (+) 396 WP_031808670.1 transcriptional regulator SpxA -
  CGQ01_RS03825 (CGQ01_00683) mecA 735361..736080 (+) 720 WP_001217728.1 adaptor protein MecA -
  CGQ01_RS03830 (CGQ01_00684) coiA 736201..737187 (+) 987 WP_000959282.1 competence protein CoiA family protein Machinery gene
  CGQ01_RS03835 (CGQ01_00685) pepF 737235..739043 (+) 1809 WP_000082725.1 oligoendopeptidase F -
  CGQ01_RS03840 (CGQ01_00686) yjbH 739503..740309 (-) 807 WP_015445788.1 protease adaptor protein YjbH -
  CGQ01_RS03845 (CGQ01_00687) - 740332..740697 (-) 366 WP_000214070.1 truncated hemoglobin YjbI -
  CGQ01_RS03850 (CGQ01_00688) - 740801..741394 (-) 594 WP_000224619.1 CYTH domain-containing protein -
  CGQ01_RS03855 (CGQ01_00689) - 741580..741927 (+) 348 WP_001242109.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38878.55 Da        Isoelectric Point: 9.5714

>NTDB_id=243139 CGQ01_RS03830 WP_000959282.1 736201..737187(+) (coiA) [Staphylococcus aureus strain 187]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNETIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFHSLFINPITRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKIIELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVYNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLVNDNLNYFKLKKFIVALESKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=243139 CGQ01_RS03830 WP_000959282.1 736201..737187(+) (coiA) [Staphylococcus aureus strain 187]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGTGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCTGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAAACGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCATAGTTTGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGCCAAAATTATTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGTACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAATCTTAATTATTTTAAACTGAAAA
AATTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-308)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7EXT8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

100

100

1
  coiA Staphylococcus aureus MW2

97.561

100

0.976

Multiple sequence alignment