Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   STU_RS14785 Genome accession   NC_006448
Coordinates   1004075..1004557 (-) Length   160 a.a.
NCBI ID   WP_011226072.1    Uniprot ID   Q5M461
Organism   Streptococcus thermophilus LMG 18311     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 999075..1009557
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STU_RS14765 (stu1139) pepT 999555..1000778 (-) 1224 WP_011226068.1 peptidase T -
  STU_RS14770 (stu1140) lepB 1000987..1001544 (-) 558 WP_011226069.1 signal peptidase I -
  STU_RS14775 (stu1141) - 1001667..1002896 (-) 1230 WP_011681192.1 tetratricopeptide repeat protein -
  STU_RS14780 (stu1142) - 1002886..1004064 (-) 1179 WP_011226071.1 AI-2E family transporter -
  STU_RS14785 (stu1143) mutX 1004075..1004557 (-) 483 WP_011226072.1 NUDIX hydrolase Machinery gene
  STU_RS14790 (stu1144) ftsX 1004713..1005642 (-) 930 WP_041828245.1 permease-like cell division protein FtsX -
  STU_RS14795 (stu1145) ftsE 1005635..1006327 (-) 693 WP_002953094.1 cell division ATP-binding protein FtsE -
  STU_RS14805 (stu1148) queG 1007566..1008684 (-) 1119 WP_011226076.1 tRNA epoxyqueuosine(34) reductase QueG -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18869.36 Da        Isoelectric Point: 4.7200

>NTDB_id=24277 STU_RS14785 WP_011226072.1 1004075..1004557(-) (mutX) [Streptococcus thermophilus LMG 18311]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREIFEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=24277 STU_RS14785 WP_011226072.1 1004075..1004557(-) (mutX) [Streptococcus thermophilus LMG 18311]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCATTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5M461

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706

Multiple sequence alignment