Detailed information    

insolico Bioinformatically predicted

Overview


Name   comGE   Type   Machinery gene
Locus tag   CGP89_RS07755 Genome accession   NZ_CP022893
Coordinates   1461114..1461413 (+) Length   99 a.a.
NCBI ID   WP_000844410.1    Uniprot ID   A0A7R6NZL1
Organism   Staphylococcus aureus strain 61     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1456114..1466413
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CGP89_RS07715 - 1456175..1456378 (+) 204 WP_000087561.1 YqgQ family protein -
  CGP89_RS07720 (CGP89_01381) - 1456375..1457361 (+) 987 WP_000161309.1 ROK family glucokinase -
  CGP89_RS07725 (CGP89_01382) - 1457361..1457690 (+) 330 WP_001018871.1 MTH1187 family thiamine-binding protein -
  CGP89_RS07730 (CGP89_01383) - 1457687..1458310 (+) 624 WP_001223008.1 MBL fold metallo-hydrolase -
  CGP89_RS07735 (CGP89_01384) comGA 1458362..1459336 (+) 975 WP_000697220.1 competence type IV pilus ATPase ComGA Machinery gene
  CGP89_RS07740 (CGP89_01385) comGB 1459308..1460378 (+) 1071 WP_000776422.1 competence type IV pilus assembly protein ComGB Machinery gene
  CGP89_RS07745 (CGP89_01386) comGC 1460392..1460703 (+) 312 WP_000472256.1 competence type IV pilus major pilin ComGC Machinery gene
  CGP89_RS07750 (CGP89_01387) comGD 1460681..1461127 (+) 447 WP_001788899.1 competence type IV pilus minor pilin ComGD Machinery gene
  CGP89_RS07755 (CGP89_01388) comGE 1461114..1461413 (+) 300 WP_000844410.1 hypothetical protein Machinery gene
  CGP89_RS07760 (CGP89_01389) comGF 1461331..1461828 (+) 498 WP_001788897.1 competence type IV pilus minor pilin ComGF Machinery gene
  CGP89_RS07765 - 1461925..1462071 (+) 147 WP_001792109.1 hypothetical protein -
  CGP89_RS07770 (CGP89_01390) - 1462061..1462585 (+) 525 WP_001015120.1 shikimate kinase -
  CGP89_RS07775 (CGP89_01391) gcvT 1462744..1463835 (+) 1092 WP_000093349.1 glycine cleavage system aminomethyltransferase GcvT -
  CGP89_RS07780 (CGP89_01392) gcvPA 1463855..1465201 (+) 1347 WP_000019691.1 aminomethyl-transferring glycine dehydrogenase subunit GcvPA -

Sequence


Protein


Download         Length: 99 a.a.        Molecular weight: 11079.18 Da        Isoelectric Point: 9.9215

>NTDB_id=242744 CGP89_RS07755 WP_000844410.1 1461114..1461413(+) (comGE) [Staphylococcus aureus strain 61]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQSIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY

Nucleotide


Download         Length: 300 bp        

>NTDB_id=242744 CGP89_RS07755 WP_000844410.1 1461114..1461413(+) (comGE) [Staphylococcus aureus strain 61]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAATCAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7R6NZL1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGE Staphylococcus aureus N315

100

100

1

  comGE Staphylococcus aureus MW2

85.965

100

0.99


Multiple sequence alignment