Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   CJZ71_RS22920 Genome accession   NZ_CP022891
Coordinates   2686660..2686800 (+) Length   46 a.a.
NCBI ID   WP_225910706.1    Uniprot ID   -
Organism   Bacillus subtilis strain DKU_NT_03     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2681660..2691800
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CJZ71_RS22915 srfAB 2683593..2686568 (+) 2976 Protein_2770 surfactin non-ribosomal peptide synthetase SrfAB -
  CJZ71_RS22920 comS 2686660..2686800 (+) 141 WP_225910706.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5260.11 Da        Isoelectric Point: 8.7633

>NTDB_id=242677 CJZ71_RS22920 WP_225910706.1 2686660..2686800(+) (comS) [Bacillus subtilis strain DKU_NT_03]
MNRSGKHLISCIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=242677 CJZ71_RS22920 WP_225910706.1 2686660..2686800(+) (comS) [Bacillus subtilis strain DKU_NT_03]
TTGAACCGATCAGGCAAGCATCTTATCAGCTGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

97.826

100

0.978

Multiple sequence alignment