Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   CJZ71_RS17055 Genome accession   NZ_CP022891
Coordinates   3228111..3228905 (+) Length   264 a.a.
NCBI ID   WP_014479217.1    Uniprot ID   -
Organism   Bacillus subtilis strain DKU_NT_03     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 3223111..3233905
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CJZ71_RS17025 (CJZ71_17025) sxzA 3223950..3224981 (+) 1032 WP_003243057.1 iron ABC transporter permease -
  CJZ71_RS17030 (CJZ71_17030) yfhB 3225096..3225977 (+) 882 WP_069837383.1 PhzF family phenazine biosynthesis isomerase -
  CJZ71_RS17035 (CJZ71_17035) yfhC 3226065..3226649 (+) 585 WP_032723010.1 nitroreductase -
  CJZ71_RS17040 (CJZ71_17040) yfhD 3226688..3226879 (-) 192 WP_003233561.1 YfhD family protein -
  CJZ71_RS17045 (CJZ71_17045) yfhE 3226946..3227056 (-) 111 WP_003223230.1 YfhE family protein -
  CJZ71_RS17050 (CJZ71_17050) yfhF 3227111..3228022 (-) 912 WP_041332787.1 TIGR01777 family oxidoreductase -
  CJZ71_RS17055 (CJZ71_17055) recX 3228111..3228905 (+) 795 WP_014479217.1 recombination regulator RecX Regulator
  CJZ71_RS17060 (CJZ71_17060) yfhH 3228907..3229221 (+) 315 WP_003244592.1 YfhH family protein -
  CJZ71_RS17065 (CJZ71_17065) yfhI 3229364..3230557 (+) 1194 WP_003243500.1 MFS transporter -
  CJZ71_RS17070 (CJZ71_17070) sspK 3230589..3230741 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  CJZ71_RS17075 (CJZ71_17075) yfhJ 3230866..3231135 (+) 270 WP_003243789.1 YfhJ family protein -
  CJZ71_RS17080 (CJZ71_17080) yfhK 3231280..3231798 (+) 519 WP_014479218.1 SH3 domain-containing protein -
  CJZ71_RS17085 (CJZ71_17085) spdL 3231883..3232215 (+) 333 WP_014479219.1 SdpC immunity protein SpdL -
  CJZ71_RS17090 (CJZ71_17090) ephM 3232202..3233062 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31029.21 Da        Isoelectric Point: 6.6686

>NTDB_id=242654 CJZ71_RS17055 WP_014479217.1 3228111..3228905(+) (recX) [Bacillus subtilis strain DKU_NT_03]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAIK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=242654 CJZ71_RS17055 WP_014479217.1 3228111..3228905(+) (recX) [Bacillus subtilis strain DKU_NT_03]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATTAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992

Multiple sequence alignment